| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0538 |
|---|
| Symbol | |
|---|
| ID | 5453949 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 579609 |
|---|
| End bp | 581003 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640876106 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001411818 |
|---|
| Protein GI | 154250994 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 0.0918925 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATGA TGCTGGACGG TCCGATCAAG ATTCTCGTGC CCACCGGGTC GCTGGGCGCC
GGTGCGCGGG AGGAGGAGGT GCGCTACGGC ATCGCCCAGG GCGCCCATGC CATTGCCACC
GATGCGGGCT CGACGGACAG CGGCGCCGCC TATCTGGCGC TCGGCATTTC CAAGAACAAT
CGCGGCTCGG TGAAGCGCGA CCTGACGATC CTGATGCGGG CGGGAGCGGA AGCGGGGATT
CCGCTGATCG TCGGCACATG CGGACAGGCG GGCGGAGACA AGAACCTCGA CTGGACCCGC
GACATCGTTG TGGAAGTGGC CGCCGAACTC GGCATTCGCC CGAAGATCGC GCTGCTCTAC
AGCGAACAGG ACAAGGAGAT GCTGAAGGCG CGCAATGCCG CCGGAAAAAT CCGGCCGCTG
CCGCCGCTCG GTCCGCTGGA CGATGCGACC ATCGAAAGCT GCGACCACAT CGTCGCCGCC
ATGGGCCCGG AGCCCTACAT CGCCGCATTG AAAGCGGGGG CCGACATTGT GCTGGGCGGC
CGCACCACCG ACACGGCGGT GCTCGCCTGT TTCGCGCTGA TGAAGGGCGC GCCCTCCGGT
CCGTCATGGC ATGCTGCGAA AGTCGCCGAG TGCGGCGCGC AATGCACCAT GTACCCCACC
AACGGCGCCG GTGTGCTGAT CAGCATCGGC AATGACGGCT TCGAGGTGGA GCCGCTCAGC
CCCGGCAATC GCTGCGACCC GGACAGTGTG TCGGCGCATA TGCTTTATGA GAACAGCAAT
CCCTTCCTGC TGACCGAACC CGGCGGCGTG CTGAACGTCA CGGATGCCGA TTATGCCGCC
GTCGACGAGC GCAGGGTGCG GGTGACAGGT TCGGTCTGGG AGCCAGCGCC TTATACGATG
AAGCTTGAAG GCGCGGGCGG CGGCAAATTC CAGACGATCA TGCTTGTCGG CATTCAGGAC
CCCGATGTGC TCTGCCGCGT CGATGAATTC CACGACAATC TGCTGGCGGC GCTTTACGAG
CGCACGCGAA AGACCATCGG CGCGGCGGCC GGCGATTTCC ATATTTCGCT CAGGATGTAT
GGCTGGAACG CCGTTTCCGG CGACCGTCCG CCACCGGGCA CGGCGGCGCC GCGCGAAATC
GGCGTGCTGT TCGTCGCCAC GGCGGAGAGC CAGGAAATGG CGACGCAGAT CGCCAAGGCC
TGCAACCCCT ATTTCTTTCA CTTCCCCGTT GTGCTGGACA AGGAACTGCC GAGCTATGGC
TTTGCCTTCT CGCCCGCCGA CATAGAGCGC GGACCGGTTT ACGAGTTCAA ACTCAATCAC
GTGATCGAGC TCGACGATCC GATGGAACTG GTGCGCACCA AATGGATCGA TCTGGCGAAA
GGGGAGGGCG CATGA
|
|---|
| Protein sequence | MRMMLDGPIK ILVPTGSLGA GAREEEVRYG IAQGAHAIAT DAGSTDSGAA YLALGISKNN
RGSVKRDLTI LMRAGAEAGI PLIVGTCGQA GGDKNLDWTR DIVVEVAAEL GIRPKIALLY
SEQDKEMLKA RNAAGKIRPL PPLGPLDDAT IESCDHIVAA MGPEPYIAAL KAGADIVLGG
RTTDTAVLAC FALMKGAPSG PSWHAAKVAE CGAQCTMYPT NGAGVLISIG NDGFEVEPLS
PGNRCDPDSV SAHMLYENSN PFLLTEPGGV LNVTDADYAA VDERRVRVTG SVWEPAPYTM
KLEGAGGGKF QTIMLVGIQD PDVLCRVDEF HDNLLAALYE RTRKTIGAAA GDFHISLRMY
GWNAVSGDRP PPGTAAPREI GVLFVATAES QEMATQIAKA CNPYFFHFPV VLDKELPSYG
FAFSPADIER GPVYEFKLNH VIELDDPMEL VRTKWIDLAK GEGA
|
|---|
| |