Gene Plav_0526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0526 
SymbolinfA 
ID5456341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp565244 
End bp565462 
Gene Length219 bp 
Protein Length72 aa 
Translation table11 
GC content58% 
IMG OID640876093 
Producttranslation initiation factor IF-1 
Protein accessionYP_001411806 
Protein GI154250982 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0361] Translation initiation factor 1 (IF-1) 
TIGRFAM ID[TIGR00008] translation initiation factor IF-1 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.11892 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.0775298 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAGG AAGAACTGCT CGAGTTTCCG GGCGTGGTGA CGGAACTGCT GCCCAACGCA 
ACGTTCCGCG TGAAGCTCGA GAACGAACAC GAAATCATCG CCCACACAGC GGGCAAGATG
CGCAAGAACC GCATCCGCGT CCTCGCGGGC GACAAGGTGC TTGTCGAAAT GACACCTTAC
GACCTGACGA AGGGCCGGAT CACCTACCGG TTCAAGTGA
 
Protein sequence
MSKEELLEFP GVVTELLPNA TFRVKLENEH EIIAHTAGKM RKNRIRVLAG DKVLVEMTPY 
DLTKGRITYR FK