Gene Plav_0522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0522 
Symbol 
ID5455767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp562650 
End bp563171 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content61% 
IMG OID640876089 
Producthypothetical protein 
Protein accessionYP_001411802 
Protein GI154250978 
COG category[S] Function unknown 
COG ID[COG5328] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.114878 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGACC AGAGCGCTCA TGACAGCAAC GAGGAAACCG CCGCGCCCGC AGGCGCGACG 
TTTCGCATCG TCGATCTCGT CCTCGACGAG CGCACCGTCA TGCGCCGCAG CCCGGATGTC
GAGCATGAGC GAAAGGTCGC GATCTTCGAT CTCTTGGAGG AAAACCATTT CGCGCCGGTC
GGCAGCGACG GGGGGCCTTA CGTGCTCCAC CTCGCCATCG AGGAAAACCG CCTCGTCTTC
GACATCCGTC TCGAGCCGTC CGAGCCGCAT GGGAAGGTCC TCCTGTCGCT CACGCCCTTC
CGCCGGATCA TCAAGGACTA CTTCATGATC TGCGAAAGCT ATTACGACGC GATCAAGACG
GCCGCGCCCG CGCAGATCGA AGCGATAGAC ATGGGCCGCC GCGGTCTCCA CAACGAAGGT
TCCGAGCTGT TGAAGGAGCG TCTCGCGGGC AAGATCGACA TGGATTTCGA TACCGCGCGC
CGCCTCTTCA CACTCATCTG TGTACTGCAT ATCAAGGGAT GA
 
Protein sequence
MPDQSAHDSN EETAAPAGAT FRIVDLVLDE RTVMRRSPDV EHERKVAIFD LLEENHFAPV 
GSDGGPYVLH LAIEENRLVF DIRLEPSEPH GKVLLSLTPF RRIIKDYFMI CESYYDAIKT
AAPAQIEAID MGRRGLHNEG SELLKERLAG KIDMDFDTAR RLFTLICVLH IKG