| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0450 |
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| Symbol | |
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| ID | 5454710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 484210 |
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| End bp | 485100 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640876016 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001411730 |
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| Protein GI | 154250906 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.10442 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACGA TGTTTCGCGA CGGGCTTTTG AAGGGCAAGC GCATTCTGGT GACGGGCGGC
GGCACGGGGC TCGGCAAGGA AATGGCCGAG GATTACCTGC GGCTCGGCGC GGAGGTTTAT
ATCTGCGGGC GGCGGAAAAA CGTGCTCGAC GAGACGGCGA AAGAGCTGAT GGCCAGGCAT
GGCGGCTCGG TGAAGACGCA TAGCGTCGAC ATTCGCGTGG CGCAGGCCGT GGACGACATG
GTGGCGGAAA TCTGGGCGGA TGGCGGGCCG CTGACGGGGC TTGTGAACAA TGCGGCGGGG
AATTTCATCT CGCCGACGAA GGACCTTTCG CCGCGCGGCT TCGACGCGAT CGCAAATATC
GTGTTTCACG GCTCGTTCTA TGTGACGCAT GCGATCGGCC GGCGCTGGAT CGAGGACAAG
GTGAAGGGGA GCGTGATTTC CATTCTCACC ACCTGGGTCT GGAATGGCGG GCCCTTCACC
GTGCCTTCCG CCATGTCGAA GGCGGGCGTC AACATCATGA CGAAATCGCT CGCCGCCGAA
TGGGGGCCTT ACGGCATCCG CCTCAATGCG ATTGCGCCGG GGCCCTTTCC GACCGAAGGC
GCATGGGCGC GGCTTTCGCC CGGACAATCG ACGGATGGCG ACGGCTCGCG CGAGGGCATT
CCGATGGGGC GCGTGGGCGA GATGGACGAA TTGAAGAACC TCGCGACGTT TCTCATGGCG
GATGGCTGCG AGTATCTGAC GGGCCAGTGC ATCGCCATCG ACGGCGCGGG CTTTTCAGGC
GGCGGCGGAA ATTTTGCGCG GCTCTCCAAG CTCTCCGACG AGGAATGGGA CAAGATGCGC
GAGATGATCC GCGGCGCGAA TGAGAAGGAC AAGGCGCAGA GGAGCGTTTG A
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| Protein sequence | MATMFRDGLL KGKRILVTGG GTGLGKEMAE DYLRLGAEVY ICGRRKNVLD ETAKELMARH
GGSVKTHSVD IRVAQAVDDM VAEIWADGGP LTGLVNNAAG NFISPTKDLS PRGFDAIANI
VFHGSFYVTH AIGRRWIEDK VKGSVISILT TWVWNGGPFT VPSAMSKAGV NIMTKSLAAE
WGPYGIRLNA IAPGPFPTEG AWARLSPGQS TDGDGSREGI PMGRVGEMDE LKNLATFLMA
DGCEYLTGQC IAIDGAGFSG GGGNFARLSK LSDEEWDKMR EMIRGANEKD KAQRSV
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