Gene Plav_0442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0442 
Symbol 
ID5456493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp476882 
End bp477349 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content64% 
IMG OID640876008 
Producthypothetical protein 
Protein accessionYP_001411722 
Protein GI154250898 
COG category[S] Function unknown 
COG ID[COG5388] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACAA TCGAAGGCGG CCTTACCGTT CTGAAGGATA TGGAGGTGCT TGCGGCGCCG 
CTGCCCGCGC TCCTCTCCTA TTGGGAAAGC AAGCGGGCGG GCCGTCTCAT GCCGGCACCC
TCCGACATCA ACCCGGTCGA AATCCCGCGC CTGCTTCCCT TCCTCACCAT CGCGGACGTC
ACCTATGATC CGCTCGATTT CCGCTATCGC CTCGTCGGCA CCCGGATCGT CGAGATGACC
GGCGTCGATC GCACCGGCCG CTCCCTGCGC GAAGGGCATG AAGGTGAAAG GCTGGAAGAA
CGTCTCGCCG GGCTCCGCGA CATGCTTCGC TCGCCGGCGC CCATCGCCTT TTCCGGCCGC
TTTGATTGGC TCGGCCGCGA CTACCGCCGA TTCGAATGCA TCCAGCTGCC GCTCTCATCG
GATGGCGAAA GGATCAGCCG CCTTGTCGCA GCGTATGCCT TCCCTTGA
 
Protein sequence
MLTIEGGLTV LKDMEVLAAP LPALLSYWES KRAGRLMPAP SDINPVEIPR LLPFLTIADV 
TYDPLDFRYR LVGTRIVEMT GVDRTGRSLR EGHEGERLEE RLAGLRDMLR SPAPIAFSGR
FDWLGRDYRR FECIQLPLSS DGERISRLVA AYAFP