| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0441 |
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| Symbol | |
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| ID | 5453763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 476133 |
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| End bp | 476834 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640876007 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_001411721 |
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| Protein GI | 154250897 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCGG GCGGCGAGAA GGAAATATTA CGATGTGTGA AGCGTTTGCG CCGCGCCCCG
CCCCAAAATT CGCAGACGAA TTTTGACCCT CCCCCAAGGG GAGGGTGGGT AGAGAAAAGC
GGGTTGACTT GGCGCGGCGG CGTGGCGCTA TTAGAACAGC GTAGCGAGCG AGGAAACATG
GCCGCCGACG ACGACTTCAA ACCCGAACAT ATCGAGCTGA TGAAGAATGT GCTGATCGAG
CATGTGCCGC ATGCGAAGGC GATCGGGCTT ACCGTTGCCG ATGCGAAGCG GGGACAGGCC
TGGCTTTCCA TTCCCTACGC GGAAAAGCTG ATCGGCAATC CGGAGACGGG TGTGATCCAT
GGCGGCGTCA TCACGTCGCT GCTCGACAAT GCCTGCGGCA TCGCGGTGCA GCTTGCGCTG
CCGGAGCGCA TGTCCATTGC GACGCTCGAC CTGCGGATCG ACTACATGAA GCCGGCGACG
CCGAAGCTCG ACCTGATGGC GCATACGCAT TGCTACAAGG TGACGAAGAA CATCGCCTTT
GTGCGCGGCA CGGCCTATCA CACGGATGAG GAAGACCCCA TCGCCACCTG CGTCGGCACT
TTCATGCTGG GCGCGAACCG GGCGGCGCCG ATGCCGGTAT CGCCGGACGC CGCGGACGAG
GCGATGAAAC TGCTGGCGAA GAACAAGGGG GGCGCGGCAT GA
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| Protein sequence | MQAGGEKEIL RCVKRLRRAP PQNSQTNFDP PPRGGWVEKS GLTWRGGVAL LEQRSERGNM
AADDDFKPEH IELMKNVLIE HVPHAKAIGL TVADAKRGQA WLSIPYAEKL IGNPETGVIH
GGVITSLLDN ACGIAVQLAL PERMSIATLD LRIDYMKPAT PKLDLMAHTH CYKVTKNIAF
VRGTAYHTDE EDPIATCVGT FMLGANRAAP MPVSPDAADE AMKLLAKNKG GAA
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