| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0424 |
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| Symbol | |
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| ID | 5453509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 456871 |
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| End bp | 458829 |
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| Gene Length | 1959 bp |
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| Protein Length | 652 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640875990 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001411704 |
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| Protein GI | 154250880 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.32532 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGGACG GGCAAAGCGA TGCGCGCGTA GAACAGGCGC GCCTATCCGA GCGGAAACCG
GGGCGACGGG CCCCTCGGGG CAGGCCTCAG CCGGGTTCGC GGCCGCTGCT GGGCGAGATG
GCGGTGGAAG CGGGGCTGGT TCAGCCGGAG GCATTGGCAC CGGCGCTCGA AAAGCAGGCG
CATTGGGGCG GACCGCTCGG CAGAATTCTC GTCAGCATCG GCGCCATGCG AGTGGCAGAC
GTGGCGCGGC TTTACGGACG GCAGCGCGGC CTCCCCTTCG TCGACCTGCA GGAAGAGCCG
CATGAGACGA GCCTCGCCAG CTCGGAACGG CTCGATTTCT ATCTTCGCGA AATGTGCCTG
CCGTGGCGGC GGCGCGCCGG TGAGACGATC TATGTGGCCG CCGATCCGGA TCGCTCGCGC
GCAGCCATTA CGGGACAAGA GGGGCGGCCG CTGCCGGTCT TCGTAACCTC GCCGCGCGAC
ATCAGCCGCA CCGTGACGCG CGCATTCGGC CAGGCGCTGA CGGACCGGGC GATTTTTCAT
CTGCGGCGAC AAATGCCGGA AAGTTCCGCC GCCTACCGCC TCTCCGCGCC GCAATCGGCT
TTTCTTCTGC TGGTGGCCCT CGCGCTGCTG ACCTTTCTCG CCACGGCGCC GATATCTTTG
CTGTCGGGAG CGACTGCCAC AATCGGCATC ACATTTCTCC TGATCGCCAC GCTCCGCTAT
ATGTCGATCT TTATCGGCCT GCTGGCAGAG CCGACGCGCG AAGAGCTCGC CTTCAGCAAC
TACGGCGTAC CGCTCGACAA GGATCTTCCC GTCTACACGG TGATGGTGCC GCTTTTTCGC
GAAGCAAGCG TGCTGCCTAT TCTTGCGACG GCATTGCGCG AACTCGACTA TCCGGCATCG
AAGCTCGACA TCAAGTTCAT CTTCGAAGAG AGCGATGTTG AAACCTACGA AGCGGCAAAG
GCGCTCAGAT TACCGGATCA TTTCGAGTTC ATCGTCGTAC CCACGAGCTT TCCGCAGACA
AAGCCCAAGG CATGCAATTT CGCCCTGCCT TTCGCCCGAG GCGAATTCCT CGTCATTTAC
GACGCGGAAG ACGCGCCCGA GCCGCAGCAG CTGAAAAAGG CGGTTTCTGC GTTCCGGCTC
GGCGACGAAA AACTCGCCTG CGTTCAGGCC CAGCTCAACT ACTACAACTG GCGGGAGAAC
TGGCTGACGC GGCAGTTCGC ACTTGAATAT GCGGCCTTCT TCGATCTGAT GCTGCCGACC
ATGGCGCGGC TGCGGCTGCC GATACCGCTT GGCGGCACGT CCACCCATTT TCGCACCGAA
CTGCTACGGA ATGCCGGCGC GTGGGACCCG AACAATGTAA CGGAGGATGC CGATCTCGGG
CTCCGTTTCG CCCTGCATGG TTATCGCTGC AGCATCATCC GCTCGACGAC CGAAGAGGAG
GCGAACTGCA AGCTGCCCAA CTGGGTCCGC CAACGCTCGC GCTGGATAAA GGGCTGGATG
CAAACCTATC TCGTTCGCAT GCGGCATCCC GTGCGCCTCT ACAGGGCGCT GGGCTTGCGC
GGCTTCATCG GCTTTCAGGT CCTGATAGGC GGTTCGACGC TTTCCAGCCT CTTGCACCCC
TTCCTCTATC TCGGCCTGAT CGTGCCGCTG ATCGAGAGCG GACTTGCCGG CGATCTGACC
GGTCTCACGG TCTTTCACCT GCTGGTTCTG GTTTCGGGTT ACGCGCTGGC GGTCTCCGCG
GGACTTGCCG CTGCTTCGGC ACGCGGCCTT CCCCAGCTCT TCATTCACAC CCTGACAATG
CCCGCCTATT GGCTGCTGCT TTCGTTCGCC GCCTACAAGG CCCTGTGGCA GCTTGTGGTA
AAGCCGTTTC ATTGGGAAAA AACGGATCAT GGCATCAGCC GCATGCTGCC GGCCAGGCTG
AAAGGGCCGG TTTCCAGCCA GTTTGTCTCG CCGCACTAA
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| Protein sequence | MQDGQSDARV EQARLSERKP GRRAPRGRPQ PGSRPLLGEM AVEAGLVQPE ALAPALEKQA
HWGGPLGRIL VSIGAMRVAD VARLYGRQRG LPFVDLQEEP HETSLASSER LDFYLREMCL
PWRRRAGETI YVAADPDRSR AAITGQEGRP LPVFVTSPRD ISRTVTRAFG QALTDRAIFH
LRRQMPESSA AYRLSAPQSA FLLLVALALL TFLATAPISL LSGATATIGI TFLLIATLRY
MSIFIGLLAE PTREELAFSN YGVPLDKDLP VYTVMVPLFR EASVLPILAT ALRELDYPAS
KLDIKFIFEE SDVETYEAAK ALRLPDHFEF IVVPTSFPQT KPKACNFALP FARGEFLVIY
DAEDAPEPQQ LKKAVSAFRL GDEKLACVQA QLNYYNWREN WLTRQFALEY AAFFDLMLPT
MARLRLPIPL GGTSTHFRTE LLRNAGAWDP NNVTEDADLG LRFALHGYRC SIIRSTTEEE
ANCKLPNWVR QRSRWIKGWM QTYLVRMRHP VRLYRALGLR GFIGFQVLIG GSTLSSLLHP
FLYLGLIVPL IESGLAGDLT GLTVFHLLVL VSGYALAVSA GLAAASARGL PQLFIHTLTM
PAYWLLLSFA AYKALWQLVV KPFHWEKTDH GISRMLPARL KGPVSSQFVS PH
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