Gene Plav_0404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0404 
Symbol 
ID5454773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp437745 
End bp438740 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content63% 
IMG OID640875969 
ProductHsp33 protein 
Protein accessionYP_001411684 
Protein GI154250860 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1281] Disulfide bond chaperones of the HSP33 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTTTCAG TAAAGGAAGA AGGCCGGAAA TTGTCAGTGA GTAATGAGGG CGGCATCGGT 
ATCGACGATC TTGTGCAGCC GTTTCAGATC GAGGATCTCG GCATTCGTGG CCGCGTCGTG
CGGCTTGGCC CGCTGGTCGA CCGCGTGCTG ACGGCTCATG CCTATCCCGA ACCCGTCTCC
CGCCTGCTGG GCGAGGCGCT GGCGCTCACC GCCATGATCG GCTCCGCTCT CAAGTTCGAT
GGCCGCTTCA TCCTGCAGAC GCAGAGCAAG GGTCCCGTCT CGCTGCTGGT TGCCGATTAT
GAATCGCCCG GCAAACTGCG CGGCTATGCG CAGATGGATG ACGGCCGCCT GCAGGAAGCG
TTGAAGGAAG GGCGCACCTC TCCCGCCGAC CTGCTGGGCG ACGGCTATCT CGCCCTGACG
ATCGACCAGG GGCCGGACAT GGAACGCTAT CAGGGCATCG TGGCGCTGGA CCCCAAGGGC
CTCAGTCACA GCGCCCATGA ATATTTCGCG AGCTCGGAAC AGGTGGCGAC GCGCATCCGC
CTTGCCGCCG GTCCCTTTTA TCATCGCGAG GAAACCGGCC CGGAGAAGAA CTGGCGCGCC
GGCGCGATCA TGATCCAGCA CATCCCGCGC GAGGGCGGCC TTACCGGCTA CCGCGAAGAC
GAGGACGAGC GTCCGGTCAC GGAGGAAGAG GAGAACTGGA ACCGCGCTTC CATTCTCCTG
GATACCGTGG AGGATCATGA GCTTCTCGAC CCGTCGCTGG AGCCGAACCG GCTTCTCTTC
CGCCTCTTCC ATGAGGATGG GGTGCGGGCC TATGAGCCGG CGCCGGTCGA GTTCGCCTGC
CATTGTTCGC GCGAGCGGAT GGGAAGCGTG TTGCGTTCCT TTGGCGGTCA CGAAATCGAC
GAAATGGTGC AGGATGGTGT CATCACCGCG ACCTGCGAGT TCTGCAGCGA AGTCTATGTC
TTCGCGCCGG ACGAATTGAA AGAGGATGGA AATTGA
 
Protein sequence
MLSVKEEGRK LSVSNEGGIG IDDLVQPFQI EDLGIRGRVV RLGPLVDRVL TAHAYPEPVS 
RLLGEALALT AMIGSALKFD GRFILQTQSK GPVSLLVADY ESPGKLRGYA QMDDGRLQEA
LKEGRTSPAD LLGDGYLALT IDQGPDMERY QGIVALDPKG LSHSAHEYFA SSEQVATRIR
LAAGPFYHRE ETGPEKNWRA GAIMIQHIPR EGGLTGYRED EDERPVTEEE ENWNRASILL
DTVEDHELLD PSLEPNRLLF RLFHEDGVRA YEPAPVEFAC HCSRERMGSV LRSFGGHEID
EMVQDGVITA TCEFCSEVYV FAPDELKEDG N