| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0381 |
|---|
| Symbol | |
|---|
| ID | 5455027 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 407261 |
|---|
| End bp | 408283 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640875946 |
|---|
| Product | alcohol dehydrogenase |
|---|
| Protein accession | YP_001411661 |
|---|
| Protein GI | 154250837 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2130] Putative NADP-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 70 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAACG ACGTCAACCG CCAGTTTCGC CTGAAGACGC GCCCCACCGG CCGCATCGAA
ACCTCGAACT TCGATTTCGT CGAGCAGCCG ATCCCCGAGC CCGGCCCCGG CGAGGCGCTC
ATCCGCGTCC TCTATCTCAG CCTTGATCCG ACCAACCGCA TCTGGATGAG CGACATGGAT
CAATACATGC CGCCCGTCGA AATCGGCGCG GTCATGCGCG GCGGCGGCAT CGGCGTTGTC
GTGAAGTCGA ATTCCGCCCG CTACAAGGAA GGCGATCATG TCAGCGGCCT CACCGGCTGG
CAGGACTACT GCATTGCCGA CGAAGGCATG AATGCGATGG GCGTGCTGCC GAAGGGCTTG
CCCGTCGGTC TTCCCACCAT GCTCGGCGCC TGCGGCATGA CGGGCCTCAC CGCCTATTTC
GGCCTGCTGG AGCTTGGCCG CCCTGAGCCC GGCAACACCG TCCTCGTCTC CGCCGCTGCC
GGCGCCGTCG GCTCCATCGT CGGCCAGATC GCGAAGATCA AGGGCTGCCG CGCCGTCGGC
ATTGCGGGCG GGCCGGACAA GTGCCGCCAC ATCGTCGAGG ACTTGGGCTT CGACGCGGCG
GTGGACTACA AGCGGAAGGA CTGGCGCGAA CAGCTCGCCG CCGCAACGCC GGACGGCATC
GACGTTAACT TTGAAAATGT CGGCGGCGAG ATCATGGAAG CCGTCATGGC ACGGATGAAC
CTCTTCAGCC GCATGCCCCT CTGCGGCATG ATTTCCGGCT ACAACACCGG CGACCCGGCC
ATGCGCGCCG ACTTCTCGCC CATCCTCATG CGCCGCATCG AGGTGCAAGG CTTCATCGTC
GTGGATTTCA TGGCGAAGTT CGCCGAAGGC GCAACGCAGC TCGCCACCTG GGTCGCCGAG
GGCAAGCTCA AGCACCGCGA AACCATTGTC GACGGCCTCG AAAACGCCCC CGTCGCCGTC
AACAAGCTTT TCGACGGCGG CAATATCGGC AAGCTCGTGG TCAAGGTGGC CGAGGCTCCC
TGA
|
|---|
| Protein sequence | MKNDVNRQFR LKTRPTGRIE TSNFDFVEQP IPEPGPGEAL IRVLYLSLDP TNRIWMSDMD
QYMPPVEIGA VMRGGGIGVV VKSNSARYKE GDHVSGLTGW QDYCIADEGM NAMGVLPKGL
PVGLPTMLGA CGMTGLTAYF GLLELGRPEP GNTVLVSAAA GAVGSIVGQI AKIKGCRAVG
IAGGPDKCRH IVEDLGFDAA VDYKRKDWRE QLAAATPDGI DVNFENVGGE IMEAVMARMN
LFSRMPLCGM ISGYNTGDPA MRADFSPILM RRIEVQGFIV VDFMAKFAEG ATQLATWVAE
GKLKHRETIV DGLENAPVAV NKLFDGGNIG KLVVKVAEAP
|
|---|
| |