| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0357 |
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| Symbol | |
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| ID | 5453656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 380705 |
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| End bp | 381874 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640875922 |
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| Product | integrase family protein |
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| Protein accession | YP_001411637 |
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| Protein GI | 154250813 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTCA CCGACATTTC GCTGAAGACT TTGCAGCCTC CTGTCAAGGG GCAAGTGACG
TATGCCGACG ACACCTTGCC CGGCTTCGGT GTGCGGGTAT CGCAGGGCGG CGTCAAATCG
TTCGTTGTCG TTCACGGACG CAATCGCAAG CGGACGACGA TCGGCCGTTA CCCTACGATC
AGTCTCCAAG ATGCGAGGAA GGCAGCAAAA CAGATACTTG CCGAACGCAC GCTCGGCAAA
CATGAGGCTC CGCCGATTGA TTTTGAAGCC GGCCTCAAGC TGTTCCTCGC GGCACATTTC
CCTGAGAACT ATCCAAAGCC GCGAACGCGG GCCGAAACCA AACGCCAGCT CGAAAAGCAC
TTTCTTCCAT CTCTTCGTCA CGAGAAGCTG GAGCATATTC AGGCGCGGGA AATTTCCCGG
ATCATCGACA AGATGCACAA AACTCCTGGT GAGGCCCGTC ATGCGTTTGC TGTGATCCGA
CTGTTCTTCA ACTGGGCATT CCGGCGAGGC TATGTTGATC GCAGCCCGTG CGAACGACTT
CAGGCGCCAA AACAATCGCT GCCACGAGAC CGCGTCCTTA CCCAAGACGA AATCAGGACC
GTTCTCGGTC ACGCCAGGGA AAGGGATACG ACATTCAACA GTATCGTTCA GCTGCTTCTG
CTGACCGGAC AGCGCAGGGG CGAGATCGCA TCACTTCAGG CGGACTGGAT CGACTTTGAC
AGCCGAACGA TCACTCTGCC CGCCACGGTT ACCAAGAACA AGCGTCAACA TGCTTTTCCA
TTCGGTGAGA TGGCGGAAGT AATTCTGAAG CGTGCATTAT TGCAAGCGCA GCAATCAAGA
GAAGAGCGCC GGGAATACGA GGACGCGGAC GAGAAGGCTC TCCTCCTCTT CCCTGCTCGC
GGAAAGCATA CGGCTTTCGA CGGATGGTCA AAGGGAAAGC CGAACTTCGA CAAGGGATGC
CCGATAGATC ACTGGACGCT ACACGATCTC AGGCGTACAT GCGCGACCAA TCTTGCCGCG
CTCGGCGTTC CCGTTCATGT AACCGAGAAG CTCCTGAATC ATATTTCGGG AACGACAAGC
GGGATCGTCG CGGTCTATCA ACGGCATGCT TATATGGACG AGATGCGCGA TGCCATAGAG
CGATGGGAAC TGCACTTGCG CTCGCAATAG
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| Protein sequence | MRLTDISLKT LQPPVKGQVT YADDTLPGFG VRVSQGGVKS FVVVHGRNRK RTTIGRYPTI
SLQDARKAAK QILAERTLGK HEAPPIDFEA GLKLFLAAHF PENYPKPRTR AETKRQLEKH
FLPSLRHEKL EHIQAREISR IIDKMHKTPG EARHAFAVIR LFFNWAFRRG YVDRSPCERL
QAPKQSLPRD RVLTQDEIRT VLGHARERDT TFNSIVQLLL LTGQRRGEIA SLQADWIDFD
SRTITLPATV TKNKRQHAFP FGEMAEVILK RALLQAQQSR EERREYEDAD EKALLLFPAR
GKHTAFDGWS KGKPNFDKGC PIDHWTLHDL RRTCATNLAA LGVPVHVTEK LLNHISGTTS
GIVAVYQRHA YMDEMRDAIE RWELHLRSQ
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