Gene Plav_0319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0319 
Symbol 
ID5454621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp344540 
End bp345730 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content53% 
IMG OID640875884 
Producthypothetical protein 
Protein accessionYP_001411599 
Protein GI154250775 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.452457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCAA AAATTGAGTT TTTTCCTGTA GATAACGGAG ACATGGCCCT CGTAACGCTC 
GAAAGCGGTC GCGTCATTTT AATTGATGCC AACATTAGGG CATCCGCCGA CGACAAAAAT
GATGACGAGG TACCTGATGT TGCGACGATG CTCCGAGATA GGCTGCCAAC AGACAGTCAG
GGGCGCTCGT ATATCGATGT GTTTCTGCTC ACCCATCCTG ACCAAGATCA TTGCCGGGGG
CTGAGAAAGC ATTTCCATAT TGGTCCTTCG GATGACTGGG ACGAGAGCGA AGACAAGATT
TTCATCCGCG AGATGTGGTC TTCCCCTATC GTTTTTCGTC GGAAAGACAG GATTGAATCT
CTGTGTGAGG ACGCGGCTGC CTGGCGGGAT GAAGCGCGTC GTCGTGTAAA CCTCTTCAAG
AACGCAGCCG ACCCGGCCGG CATCCAAGAT GGTGATCGTA TCTTGGTGCT TGGTGACGAT
ATTGACGGGA AAACCGAGGG CATCGACGAC ATACACGTCG CGATTGATGA GCATTTCTCG
TACATCTGCG GGGAGGAGGA TACGTCGTTT TCGTCTCTTC TCCTTGGACC ACTCCCCCCA
TCTGATGACG AAGACACAGA AGAAATTCTT GCGAAAAATC GTTCTAGCGT AATTATGCAA
ATGTCGATTG GTGCGGACGG CGTGGACAAT GCATGTCTTC TTCTGACGTG CGGCGACGCG
GAAGTCGCGA TTTGGGAACG ACAGTGGGAA TTGCGGTCAG GCGACCCTTC TTCGCTCGAA
TTCGATATTC TTCTCGCCCC TCATCACTGC TCTTGGCACG CACTGTCGTA CGACAGTTGG
TCCGACAACG GCGAAGACGC AGTACTTTCT GAGGATGCTC TGAGCGCATT AAGTCAAGCG
CACGACAATG CGGTGATCGT TTCGAGCTCA AAAGCCATTA GCGATGATGA CTCCGATCCT
CCGTGCGTGC GCGCTGAACG AGAGTACAAG AAAATTGTCG ATTCTGTCGG AGGAGACTTT
TACTGCACCA TGGATGACGG CAAAGATTCC ACGGTGCTTC TCTTCGAGAT CTGCGGCGAT
GGACCGGCAA AAAAGAGTGA CGGCGGAGGG GACGGGCCCA CAAACCCCTC GGCCTTTGGC
CCGGGCAGTA TTTCGCGTAC GGAAAAACGC GGGGGCGGAC GATACGCATA G
 
Protein sequence
MAAKIEFFPV DNGDMALVTL ESGRVILIDA NIRASADDKN DDEVPDVATM LRDRLPTDSQ 
GRSYIDVFLL THPDQDHCRG LRKHFHIGPS DDWDESEDKI FIREMWSSPI VFRRKDRIES
LCEDAAAWRD EARRRVNLFK NAADPAGIQD GDRILVLGDD IDGKTEGIDD IHVAIDEHFS
YICGEEDTSF SSLLLGPLPP SDDEDTEEIL AKNRSSVIMQ MSIGADGVDN ACLLLTCGDA
EVAIWERQWE LRSGDPSSLE FDILLAPHHC SWHALSYDSW SDNGEDAVLS EDALSALSQA
HDNAVIVSSS KAISDDDSDP PCVRAEREYK KIVDSVGGDF YCTMDDGKDS TVLLFEICGD
GPAKKSDGGG DGPTNPSAFG PGSISRTEKR GGGRYA