Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0306 |
Symbol | |
ID | 5454078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 329141 |
End bp | 329902 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640875870 |
Product | HAD family hydrolase |
Protein accession | YP_001411586 |
Protein GI | 154250762 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1877] Trehalose-6-phosphatase |
TIGRFAM ID | [TIGR00685] trehalose-phosphatase [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 71 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTCGA TGAAGGAAGA CGGGCTGCCC TTGCCCGCCC CCCAACCCGG CTGGGCCCTG TTTCTCGATT TTGACGGTAC GTTGACGGAG CTGGCTCCCT CGCCGGATGC CGTCGTTGTC GATCCGGCCA TGCCGCAGGT TCTCGCCGGT CTTCTCGAAG GTCTTGGCGG TGCTGTCGCC GTCGTTTCCG GCCGCAGCCT TGCGGAGGTC GACCGGCTGC TGGGCGTTGT CCTTCCGGGC GCCGGTGTGC ATGGGCTTGA ACTGCGGACG CATCGCGACG CCGAAATCCG GCCCCCCGCC GAGGCGGAGG GGATTGCCGT AATCGCAAGT GTGCTCACGC CACTCGTCGA GGCCGATCCG CGGCTTATCC TGGAAACAAA GCCGGGTGCC GTCGCGCTTC ACTACCGCCG CGCGCCTGAA CGCGAAAAGG AGTGCCGTGC CGCCATGAAA GCGGCAGTCG CAGGCACGAC CGGTATCCAT GTGATCGACG GCAAGATGGT ACTGGAGGCC AAGCCCGACC ATGTGAACAA GGGCTATGCT ATCGAAAATC TGATGCAGGT CCCGCCTTTT GCAGGCCGGG TGCCGGTCTT CGCGGGCGAT GATCGCACCG ATGAGGACGG CTTCGGGGTC GTCAGGGCGC TGAAAGGCGT TACGATAAAG ATCGGGCCGG GACTTTCCCG TGCCGAATAC CGGGTGGCTT CGGTCGAAGC CTTCATTGAT TGGTTGAAAG AGGTGGCGTC GGTGTTGTCG GACACCGGCT GA
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Protein sequence | MDSMKEDGLP LPAPQPGWAL FLDFDGTLTE LAPSPDAVVV DPAMPQVLAG LLEGLGGAVA VVSGRSLAEV DRLLGVVLPG AGVHGLELRT HRDAEIRPPA EAEGIAVIAS VLTPLVEADP RLILETKPGA VALHYRRAPE REKECRAAMK AAVAGTTGIH VIDGKMVLEA KPDHVNKGYA IENLMQVPPF AGRVPVFAGD DRTDEDGFGV VRALKGVTIK IGPGLSRAEY RVASVEAFID WLKEVASVLS DTG
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