| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0283 |
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| Symbol | |
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| ID | 5453752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 303848 |
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| End bp | 304717 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640875847 |
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| Product | putative methylisocitrate lyase |
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| Protein accession | YP_001411563 |
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| Protein GI | 154250739 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2513] PEP phosphonomutase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.548186 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAGCC TCGGCGATCT TCTGGCGGCG CCCGGCATTC TGGTCGCGCC CGGCGCCTAT
GATGCATTGT CGGCGAAGCT GGCGGCGAAG GTGGGCGCGC GCGTGGTCTA CATGACGGGT
TTCGGCGTTG CGGGCGCGAG CTTCGGTGTG CCGGATATCG GGCTTGTGAG TGCCACGGAA
ATGAGCGAGC GCGTGCGCGC GATTGCGGGC GCGGCGGCGC CTGTGCCGCT GATCGCCGAT
GGAGACAATG GGCATGGCGG GCCCTTGAAC GCGGCGCGGC TGACACGCGC CTATGAGGCG
GCGGGCGCGG CCTGCATCCA GATCGAGGAT CAGGTTTTTC CGAAACGCTG CGGCCATATG
GAAGGCAAGG AAGTCGTCGC GCTGGAAGAA GCAGCGGCGA AAATCCGCGC GGCGGCGGAA
GCGCGCGGGA GCCGCGACTT CAAGGTGATG GCACGAACGG ATGCGCGGGC GACGCATGAT
CTCGACGAGG CGCTCCGGCG CGGCGAGGCT TTCCTGAAGG CGGGCGCCGA CATTCTTTTT
GTCGAGGCGC CGCAGGGCGA AGACGAGTTG CGGAAGGTCG CGGAGACCTT CAAGGGTGTT
CCCCTTGTCG CCAATATCGT CGAGGACGGC AAGACGCCCT ATCTCGGCGC GAAGGCGCTG
GAGGAGTTGG GATTCAAGAT CGCGCTTTTT CCGGTGTCGG CTTTGCTAGC CGTCACCGCG
CGGCTCGAAG GCGTTTACGC GACGCTGCTG AAAGGCGAGG GCTTGCCCGC GGGCGAGGCG
CGCGTCACCT TCCAGCGCTA CAATGAATTG ATCGGGCTGC CGGAGATGCT GGCGGATGCG
GCGGCGATAA CCCGGGACAC AGAGAAATAG
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| Protein sequence | MTSLGDLLAA PGILVAPGAY DALSAKLAAK VGARVVYMTG FGVAGASFGV PDIGLVSATE
MSERVRAIAG AAAPVPLIAD GDNGHGGPLN AARLTRAYEA AGAACIQIED QVFPKRCGHM
EGKEVVALEE AAAKIRAAAE ARGSRDFKVM ARTDARATHD LDEALRRGEA FLKAGADILF
VEAPQGEDEL RKVAETFKGV PLVANIVEDG KTPYLGAKAL EELGFKIALF PVSALLAVTA
RLEGVYATLL KGEGLPAGEA RVTFQRYNEL IGLPEMLADA AAITRDTEK
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