| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0281 |
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| Symbol | |
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| ID | 5456285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 302663 |
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| End bp | 303307 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640875845 |
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| Product | carboxymuconolactone decarboxylase |
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| Protein accession | YP_001411561 |
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| Protein GI | 154250737 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2128] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.209486 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGAGAC TGAGACAAGT GGGCAAGGCG GATGCCGGCC CGCTGGCGCA GCAGATTTAC
ACAATGCTGT TCGGCGAGCG CGACCCGGTG AAAGAGCCCG GTACCGCCAC GGGCACGCCC
GGCAACTGGT GGACCGTCTT CGCGCTGGTG CCGGACGCCT TCAAGCACAC GACCGAAGGC
TTCCAGTTCT ACCGGAGCAA GAATCGCAAG CTCGATCCGA AGCTTCGCGA ACTCGGCCAG
ATCCGTGCCG GTTTCGCGCG CGGCTCGCAA TTCGTCTTCT CGCAGCATTG CAAGGCCTGC
CGCGATGTCG GCCTCACCGA GGAACAGATA CAGGCGATCC CGCATTGGCA GATCGCCGAT
TGCTACGCGC CCATCGAGCG CGCGCTGCTT GCCTATACCG ACTGCCTCGT GCTGCAGGGC
GGCCGCGTGC CGGAAGCGAT TTTCGATGCG ATGAAGAAGC ACCTCTCCGA CGAAGAGATT
CTCGAGTTCA CCTACATCAC CGCGACCTAT GACATGCACG CCACCATGTC GCGCGCGCTC
CGCCTCGAAT ATGACGATGT GGACGAGCGC GTGGTGGAAA TCGCCGCGCC CGCAGGCGCG
TCGGCGGACG TCATGAGCAT GGTCGACAAG CAAGGGAAGG ATTGA
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| Protein sequence | MPRLRQVGKA DAGPLAQQIY TMLFGERDPV KEPGTATGTP GNWWTVFALV PDAFKHTTEG
FQFYRSKNRK LDPKLRELGQ IRAGFARGSQ FVFSQHCKAC RDVGLTEEQI QAIPHWQIAD
CYAPIERALL AYTDCLVLQG GRVPEAIFDA MKKHLSDEEI LEFTYITATY DMHATMSRAL
RLEYDDVDER VVEIAAPAGA SADVMSMVDK QGKD
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