| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0275 |
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| Symbol | |
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| ID | 5454916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 295124 |
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| End bp | 295975 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640875839 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001411555 |
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| Protein GI | 154250731 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCCA TCGTCATCAC CGGCGTATCG ACCGGCATCG GTCACGCCGC CGCAACTGTT
GCCGCGAAAG CGGGCTTCCA TGTTTTCGGC TCCGTCCGCA AGGAAGCCGA TGCCGCGCGC
CTCAAGGCGG AACTGGGCGA CCTCTTCACA CCGCTTCTCT TCGACGTGAC GGACGAAGCC
GCCGTGAAGC AGGGCGCCGC ACAGGTCCGC GCGGCGCTCA AGGGCGAAAC GCTCACCGGC
CTCGTCAACA ATGCTGGCAT CGCCGTCTCC GGTCCGCTCC TTGAGGTGGA CCCGGACGAT
TTCCGCAAGC AGATGGAAGT GAACGTCACC GGCCCCTTCC TCGTCACGCA AGCCTTCGCG
CCGCTGCTCG GCGCCGACAA ATCGCTGAAG GGCAAGCCCG GCCGCATCGT CAATATCTCG
TCGGTTGGCG GCATTCGCGC CATGCCCTTT ATCGGTCCCT ACGCGGCGTC CAAATTCGCG
CTGGAGGGCT TCTCCGAGGC GCTGCGCCGC GAGCTGATGC TCTTCGGCAT CGACGTCATC
GTGATCGGCC CCGGCCCGGT CAAGACGGCA ATCTGGGACA AGGCGGAAGA GATCGACATC
TCGCGCTACG GCAATTCGCC CTACCTGCCG ATCCTCGAAA AATTCCAGAG GGTCTTTATC
GGTCAGGGCC GCGAGGGCCT GCCTGCCGAA AAGCTCGGCC AACTGATCCT GAAGGCGCTG
ACGACGCCGA GCCCCAAGGT CCGCTATGCG GCCGTGAAAG GCCGCCTCGC CGAAAAGGCC
CTGATGCGCT TCGCCCCCAA GCGCACGCTC GACAAGGTGA TCGCCAACAT GCTGGGGCTC
AATCCGAAAT AG
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| Protein sequence | MKSIVITGVS TGIGHAAATV AAKAGFHVFG SVRKEADAAR LKAELGDLFT PLLFDVTDEA
AVKQGAAQVR AALKGETLTG LVNNAGIAVS GPLLEVDPDD FRKQMEVNVT GPFLVTQAFA
PLLGADKSLK GKPGRIVNIS SVGGIRAMPF IGPYAASKFA LEGFSEALRR ELMLFGIDVI
VIGPGPVKTA IWDKAEEIDI SRYGNSPYLP ILEKFQRVFI GQGREGLPAE KLGQLILKAL
TTPSPKVRYA AVKGRLAEKA LMRFAPKRTL DKVIANMLGL NPK
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