| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0249 |
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| Symbol | |
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| ID | 5453730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 269861 |
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| End bp | 271873 |
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| Gene Length | 2013 bp |
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| Protein Length | 670 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640875812 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001411529 |
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| Protein GI | 154250705 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTGGC CGGCCATGGC CGGATTTGCC ATTCTCATCC TGCTGGCGGC GGCGCTTTTT
TCCTTTGCCG GAAGTGACGG GGAGCGAAAC GTAGCCGGGG ACGCCACCTC GAGCGACACC
AGCGAAACGC CCTCCCGGAC GGGTGTGAGT TCAGCCAACG GCCCGGCTTC CGCCGATGCC
GACAGGCGGC CGAACGAGGT CATAGCCTCC TCATCCACGC CAGAAGGTTT CAATCCGGAA
ATTCCCAGAC ATGGCTCCTC GCTTTTTGGC GAGTTGAAGT ATGGGCCGGA CTTCAAACAT
TTCGACTATG TGAACCCTGA AGCGCCGAAG GGCGGGCTCG TTCGCTATGG CGCCTTCGGC
AGCTTCGACA GCCTGAACGG CTTCATCGTA AAGGGACAGA CGGCCGCCGG ACTCGGCATG
ATCTACGACA CGCTGATGAC ATCCAGCATG GATGAACCTG CGTCGGAGTA CGGCCTTGTC
GCGGAGAGTG TCCGCCACCC GGCGGATTAC TCCTCCGTCA CCTATACGCT CCGCCCGCAG
GCGCGCTGGC ATGATGGCGA GAAGATCACC CCCGAAGACG TGATCTGGAC ATTCGAACAG
CTGAAGAAAA GCCACCCTTT TTACAACGCT TATTATGCCA ACGTAGTGAA GGTGGAGAAA
ACCGCCGAGC ACGAGATTAC CTTCTCGTTC AACCAGACCG GAAACCGCGA GCTGCCGCAA
ATCGTCGGAC AGCTGCCTGT ACTGCCCAAA CATTACTGGA CCGGCAAGAA CGCAAAGGGC
GAACAGCGGG ATTTCTCCGC GACCACGCTG GAACCGCCGC TCGGCAGCGG TCCCTACAAG
ATCGAACGCG TATCGCCTGG GCGGTCCATC ACATACCGGC GTGTTGAAGA TTATTGGGCC
AAGGATCTGC CGGTGAATAT CGGCACCAAT AATTTCGATG CGATGCGCTA CGAATATTAC
CGCGACGGGA CCGTGGCCCT TGAGGCACTG AAGGGCGATC GTGTGGACTT CCGGGTGGAG
AACAGCGCGA AGAACTGGGC CACCGAATAC GACATACCGG CGGTTCGTCG CGGCGCCTTG
AAGATGGAGG AAGTGCGATC GCTCAACCCG CAGGGCATGC AGGCCTTTGC CTTCAATCTC
CGCCGCGACA AGTTCAAGGA TCCCCGCGTG CGCGAAGCCT TCAATTGGGC TTTCGATTTC
GAATGGATGA ACAAGAACCT GTTCTATGGA CAGTACACGC GGGCCGACAG TTATTTTTCA
AACTCGGAGC TTGCAGCACA GGGCCTGCCT GAAGGGCGCG AACTCTCCTT GCTCAGGGAG
CTGGAAGAGG ACGTAACACC CGATATCTTC AACACGCCAT ATCGCAATCC CGTCACTGAC
GGCGGCGGCA ACAACCGGGG CAACTTGCGC AAGGCTGCCG CACTTTTGGC GGAAGCAGGC
TGGACGGTGA AAGACGGCAA ACTCGTCGAT GAAACGGGAC AGCCGATGAC CGTCGAGTTT
CTGCTCGACC AGCCGACCTT TGAGCGCGTC GTCGCCCCCT TCAGGCAATC GCTCGACAAG
CTTGGTATCC AGTCGACGAT GCGCACCGTC GATACCCCGC AGTATCAGAA CCGTACTGAC
AATCGCGATT TCGACATCAT CGTCGAAACC TTTGGCCAAT CGCTCTCGCC GGGCAATGAG
CAAAGAGAAT TCTGGGGTTG TGAGGCGGCG GATGCGCCGG GCAGCCGCAA TGTCATAGGC
ATATGCGACC CGGCGGTTGA AAAGCTGATA GAAAAAATAA TCTACGCAAA AAGCCGTGAC
GCACTTGTTG CCGCTTCGCG CGCTCTCGAC CGTGTTCTCC TTGCCGGGCA TTATGTGATC
CCGCAATGGT ATTCGCCGAA TATGCGCGTC GCTTACTGGT CCCGCCTGAA GCATCCGGAG
AAAATGCCGC CATACTCCAT TGGCTTTCCG ACAATCTGGT GGATGGACCA ATCCGCACCC
GCACCGCAAC CGGCGGCGGA AGAAGCGCGA TGA
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| Protein sequence | MTWPAMAGFA ILILLAAALF SFAGSDGERN VAGDATSSDT SETPSRTGVS SANGPASADA
DRRPNEVIAS SSTPEGFNPE IPRHGSSLFG ELKYGPDFKH FDYVNPEAPK GGLVRYGAFG
SFDSLNGFIV KGQTAAGLGM IYDTLMTSSM DEPASEYGLV AESVRHPADY SSVTYTLRPQ
ARWHDGEKIT PEDVIWTFEQ LKKSHPFYNA YYANVVKVEK TAEHEITFSF NQTGNRELPQ
IVGQLPVLPK HYWTGKNAKG EQRDFSATTL EPPLGSGPYK IERVSPGRSI TYRRVEDYWA
KDLPVNIGTN NFDAMRYEYY RDGTVALEAL KGDRVDFRVE NSAKNWATEY DIPAVRRGAL
KMEEVRSLNP QGMQAFAFNL RRDKFKDPRV REAFNWAFDF EWMNKNLFYG QYTRADSYFS
NSELAAQGLP EGRELSLLRE LEEDVTPDIF NTPYRNPVTD GGGNNRGNLR KAAALLAEAG
WTVKDGKLVD ETGQPMTVEF LLDQPTFERV VAPFRQSLDK LGIQSTMRTV DTPQYQNRTD
NRDFDIIVET FGQSLSPGNE QREFWGCEAA DAPGSRNVIG ICDPAVEKLI EKIIYAKSRD
ALVAASRALD RVLLAGHYVI PQWYSPNMRV AYWSRLKHPE KMPPYSIGFP TIWWMDQSAP
APQPAAEEAR
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