| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0244 |
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| Symbol | |
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| ID | 5454235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 263303 |
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| End bp | 264172 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640875807 |
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| Product | NLP/P60 protein |
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| Protein accession | YP_001411524 |
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| Protein GI | 154250700 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGTG AACGCGGCCC GGACCACCGC CTCAATCCCT ATCGTGACGA TCTGGCAGCG
GCGCATTTGC GTGGCGAGGT CAAGGCAACC CGCTTCGTCG AAGGCGTCGA CCGGCAGGTG
CAGGCATGTT CGCTGCCCCT GCTGCGCCGG CCGGAACTAG CCGCCCCCAT GGATACCCAA
CTTCTTTATG GGGAAGTCTT CCGCGTCTAC GAAGAAAAGA ACGGATGGGC ATGGGGCCAA
TCTGCACTCG ACGATTATGT GGGCTATGTC GAAGCGAAGG ATCTGGTCTC CCGTCCTGCA
AAGGCAACAC ATACGGTTGC CGCACTTCGA ACATTCATCT ATCCAAAACC TGATCTGAAA
ACGCGTCCGG CCCTGCCTGT CTCGATGAAC GCAAAGCTGA GAGTTGTCGG CGCGCGCGGT
AATTTCAGCG AAATTGAAAG TGGCGGGTGG GTCTTTTCGG CGCACTTGGC TACAGTCGGG
TCTTATGTGC GGGATTTCGT TGCCGTTGCC GAGGAGTTCA TCGGTGTGCC CTATCTCTGG
GGAGGGCGGG ACAGCCTGGG CGTGGATTGC TCCGGACTTG TTCAGATGGC GCTGGAGCGG
GCGGGCATCT CCTCGCTGCG CGATACCGAC ATGCAGGAAG CGACACTGGG CGAAGCGCTA
CCGGAGCCGA TCGATTTTAC CGCGCTTCAT CGGGGCGATC TCGTGTTCTG GAAAGGCCAT
GTCGGCATCA TGGTCGATGC AGAACGCATG ATCCATGCTA ACGGATTTCA TATGCGCGTC
GAAGTGGAAC GGCTCGACAT AGCGATGTCG CGCATTGCCC GTTCGGACGC GGGGCATGTC
ACGACGATCA AGAGGTTGCC GGGGCGCTGA
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| Protein sequence | MSRERGPDHR LNPYRDDLAA AHLRGEVKAT RFVEGVDRQV QACSLPLLRR PELAAPMDTQ
LLYGEVFRVY EEKNGWAWGQ SALDDYVGYV EAKDLVSRPA KATHTVAALR TFIYPKPDLK
TRPALPVSMN AKLRVVGARG NFSEIESGGW VFSAHLATVG SYVRDFVAVA EEFIGVPYLW
GGRDSLGVDC SGLVQMALER AGISSLRDTD MQEATLGEAL PEPIDFTALH RGDLVFWKGH
VGIMVDAERM IHANGFHMRV EVERLDIAMS RIARSDAGHV TTIKRLPGR
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