Gene Plav_0222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0222 
Symbol 
ID5454455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp241504 
End bp242328 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content65% 
IMG OID640875784 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001411502 
Protein GI154250678 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTCA AGACCATCCG CTACGAGCTC ACTGACGGCA TCGCGACGGT TACGCTGTCG 
CGCCCCAAAC GGCGCAATGC CTGGACGGGC CGGATGCACA CCGAATATCG CTGGGTGCTG
GCGGAAGCCG ACAAGGACCC TGCGGTCCGC GTCATCGTCG TGACGGGAGA TCCGGAGGGG
CAGGCCTTTT GCGCGGGTGC GGATATGGCC GCGCTCGAAG GCCATTCCGA GAAGGGCCGC
TACGACAGCG GCACCACGGC GGACATTGCA AAGCCGGGCT TCGGCGTCGC GCCCGAATTC
GACGCGACTT TTGCCTATCA TTTCGGGCTG ACGAAACCCG TCATCGCCGC CATCAACGGG
GCGGCGGCGG GCGTCGGTCT CGTGCTTGCG ACCTTTGCCG ATCTGCGCTT CTGCGCGGCC
GGCGTGAAAT TCACCGCCGC GCATGGGCGT TTCAACTTCC CGGCGGAATT CGGCCTCTCC
TGGGTGCTGC CCCGGATCGT CGGCCTGACC CATGCCAATG ACATCCTGCT CTCCAGCCGC
GTCTTCACCG CCGAGGAGGC TATGGAAATG GGCTTCCTCA ACAAGCTGCT GCCGCCGGAA
GGCCTCATGC CGCATGTCAT GGATTATGCG CGGAAGCTGG CGGACGGCGT CTCGCCGGGT
TCCCTCCGGG AGACCAAAAA GCAGATTTAT ACCGACCTCC ACAGGGATGC GGCAGGCGCT
GTCACGGCCG CCGAGCGCCT GTTGGAGGAG ATGATCAAGC ACCCGGACTA CAAGGAGGGG
GTAAAAGCCT GGATGGAGAA GCGCCGGGCC GAGTGGCAGG GCTAG
 
Protein sequence
MELKTIRYEL TDGIATVTLS RPKRRNAWTG RMHTEYRWVL AEADKDPAVR VIVVTGDPEG 
QAFCAGADMA ALEGHSEKGR YDSGTTADIA KPGFGVAPEF DATFAYHFGL TKPVIAAING
AAAGVGLVLA TFADLRFCAA GVKFTAAHGR FNFPAEFGLS WVLPRIVGLT HANDILLSSR
VFTAEEAMEM GFLNKLLPPE GLMPHVMDYA RKLADGVSPG SLRETKKQIY TDLHRDAAGA
VTAAERLLEE MIKHPDYKEG VKAWMEKRRA EWQG