| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0171 |
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| Symbol | |
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| ID | 5453495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 191805 |
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| End bp | 192941 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640875732 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001411451 |
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| Protein GI | 154250627 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGAGC GGCAAAAAGA TTTCGCGACG AGGATCACAG GCGGCCGTCT CCACAGGTCG
CATTTCATCG CCATCGGCAT CGGCGTCGCG ATCGCACTAT GGTTCCTGAC CGGTCTTTTC
ACCGGCGCGG ATAGTTCGGA CGGGTCACTG ACAGTCGCCG AGCAAGAGCA GGCCGGCAGC
ACAACACCTC GTGTACGCGT CATGGAATCC ACTGCGACGT TGCGGCGCGG CGCCGTGATC
ATTCGTGGCC GTACTGCTGC CAAACGTGCG GTTGAAGTGC GTGCCGAAAC GCAAGGAACC
GTAGCCGAAC TACCGGTTGA AAAGGGGGCA CGCGTCAAAA AGGGCGATGT GCTCTGCCGG
ATCGCCCTGA ACGCGCGCGA CGCCCAGCTT TCGGAGGCGC AAGCGCTGGT GACACAGCGA
CGCCTCGAGT ATGACGCTTC GCGCCAGCTG GCCGAAAAGG GTTACCGGGC CCCGACTGTC
GCTGCCGGAT CGAAAGCTGC CTATGACGCC GCGCAGGCGC GCCTGAAGCA GATGAAGGTA
GAGGTCGACC AGACCAGGAT ATTGGCTCCC TTTGACGGCA TTTTTGACGA CCGTCCGGTT
GAAGTCGGCG ACTACATGCG CGTCGGCGAC GTCTGCGGTC TTGTGGTGGA ACTCGACCCG
CTGCTTGTGA TGGGGCAAGT GTCCGAGGAT CGCGTTGGCG CGCTCCATAT CGGCGCACCC
GGTACCGCGC GCCTCGTTAC CGGCGAAACG GTGGAAGGAA AAATCCACTT TGTTGCGAAG
ACGGCCGATC CTGCGACCCG TACATTCCGC GTGGAGCTTG AGGTCCCTAA CCCAGACTTC
ACGATGCGAG CCGGAGTTAC CGCGGAAATC ATTGTGCCCG GGGGAGAGGT GCTCGCGCAC
CGCATTCCGA GTTCCGTAAT CGCGCTTGAC GATAGCGGCG TGATTGGCGT GCGCGCCGTG
GATGACGAAG GCCGCGTGAA GTTTCATCGT GTGCAGCTTA TCGACGATAC GCCTCAGGGC
CTGTGGATCG CAGGCCTGCC GCAGACGGTA ACGGTCATCA CCGTGGGGCA GGACTATGTG
AAGGAAGGCC AGAAAGTTGA GGCCATACCC GCGAACCAGG TCGGAGCAGC CCTTTGA
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| Protein sequence | MFERQKDFAT RITGGRLHRS HFIAIGIGVA IALWFLTGLF TGADSSDGSL TVAEQEQAGS
TTPRVRVMES TATLRRGAVI IRGRTAAKRA VEVRAETQGT VAELPVEKGA RVKKGDVLCR
IALNARDAQL SEAQALVTQR RLEYDASRQL AEKGYRAPTV AAGSKAAYDA AQARLKQMKV
EVDQTRILAP FDGIFDDRPV EVGDYMRVGD VCGLVVELDP LLVMGQVSED RVGALHIGAP
GTARLVTGET VEGKIHFVAK TADPATRTFR VELEVPNPDF TMRAGVTAEI IVPGGEVLAH
RIPSSVIALD DSGVIGVRAV DDEGRVKFHR VQLIDDTPQG LWIAGLPQTV TVITVGQDYV
KEGQKVEAIP ANQVGAAL
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