| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0164 |
|---|
| Symbol | |
|---|
| ID | 5453575 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 180800 |
|---|
| End bp | 182044 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640875725 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001411444 |
|---|
| Protein GI | 154250620 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 64 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGAAC ACGTGGCGAG GCGCGGCTGG TGGCGAGGTT TGGATCCCCG GAGTTCTGCT
ACCCTCTTCC TTATAGCTGC TTGCGGCACC TATGGCGCAG TCATCGCCTC CGTTCTGCCG
AGCCTTGTCG GGACGTGGAT CGCCGATGTT GGCCTCACCG AGCGTATGGC AGGGGAGGTC
GCGACGATAA ACGTGCTCGC CGCGACGCTC GGGCTCTGTC TTGCGCTCTT CCTCGTCTCG
CGGTGGTCAC TGCCACGGAT AGCGCGGCTG GGTCTTCTTC TCGCCATCTC GGGTGATCTT
CTCTCCATTC TCGCGTCGGA TATGTTGCAG CTCTCGTTCC TGCGTGCTGT ACAAGGCGTC
GGCGTTGGCT TGCTCGTCGG TGCGACGACC AACTGGATCG GACGACATGA ATACGCGGCC
CGAGGTTTCG GCATGTACAT CATGCTGCAA TTCATCCTGG CTGCGGTACT GATCGCGGCG
ATCCCGGCGC TCATGCCCTA TCTTGGAGCT GCGAGCGTTT ATGTGACACT CCTCGCGCTC
GCCGCCGTTT CCCTCATCCT TTATCCGCTG CTCGGTCTCA ATGGCGGCGC GGTGCCCCTT
CGGCCCGCCG CCGCGGAGGA ACCGGAAGAG TCCGGCGCCG CCGCCGATAC GGACTACCCC
GCCCTGCTGA AATTCCTTTC CGTTCTCGCT TTCGGCCTCT TCAACATTGC TGCCATCGGT
CTCTGGAGCT ACATGTTGCG CTATGGCGAA GTCGTCGGCC TGTCGTCGGC AGCGGCAGCA
CAAACCCTCG CAATCTCTTC GCTATGCGGC ATTCCCGGCA CGATCCTCGT TATTGCACTG
AGCGCGCGTT ACGGCCGCTT CCTGCCCTTG ATGTTGGCGC TCGCCATTTA CACCGTCCCC
GCCGCCGTTT TTGCGGTCTC CCATGTCGCG GCGGCGATCT TTGTCGCTGG CCTCGTCGTC
CAGAATATCG CTTGGGCTGT TGTCGCGCCC TATTTCCAGG CGGTCCAGGC TGCGCTGGAC
CGGAGCGGCC GCCTCGCGGT CTGGGGCATG ATAGTCGCCT CCATCGGCGC CGGCCTCGGT
CCTGCCTTTA TCGGATTTGC GATCGACGGC ACGTCTTATG GGATGGCTTT CGGAGGCGCT
GTTCTGGCTC TCGGCCTTGC TGCGCTGGCG GGGGCGGTGC CCGCTCTGGT CACCGACAGG
CGCGAACGCC CGACTCCCGC CGAAGGCATC TTGGCCGGTA GCTAA
|
|---|
| Protein sequence | MKEHVARRGW WRGLDPRSSA TLFLIAACGT YGAVIASVLP SLVGTWIADV GLTERMAGEV
ATINVLAATL GLCLALFLVS RWSLPRIARL GLLLAISGDL LSILASDMLQ LSFLRAVQGV
GVGLLVGATT NWIGRHEYAA RGFGMYIMLQ FILAAVLIAA IPALMPYLGA ASVYVTLLAL
AAVSLILYPL LGLNGGAVPL RPAAAEEPEE SGAAADTDYP ALLKFLSVLA FGLFNIAAIG
LWSYMLRYGE VVGLSSAAAA QTLAISSLCG IPGTILVIAL SARYGRFLPL MLALAIYTVP
AAVFAVSHVA AAIFVAGLVV QNIAWAVVAP YFQAVQAALD RSGRLAVWGM IVASIGAGLG
PAFIGFAIDG TSYGMAFGGA VLALGLAALA GAVPALVTDR RERPTPAEGI LAGS
|
|---|
| |