| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0131 |
|---|
| Symbol | |
|---|
| ID | 5454129 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 143979 |
|---|
| End bp | 145649 |
|---|
| Gene Length | 1671 bp |
|---|
| Protein Length | 556 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640875691 |
|---|
| Product | 2,4-dichlorophenol 6-monooxygenase |
|---|
| Protein accession | YP_001411411 |
|---|
| Protein GI | 154250587 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0320392 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACGCA TCCCCGTCCT GATCGCCGGT GCAGGCCCTG TGGGCCAGCT TTCGGCGCTG
CTGCTGGCGC GGCAGGGGAT CGCCTCGCGG CTGATCGACA GGCGGCCGCG GCCGGCCGAG
GCGCCGAAGG CCCATGCGGT GAACCCGCGG ACACTCGAAA TCTGCGAAAG CGTGGGCGTA
TCGGCGGAGG GGCTGCGCCG GGAGGGCGCG AGCGCCAATG ATGCCGGGTG GGTGCGTTTC
GTCGGTACAC TGACGGGTAC GGAATTCGGC GCCCTGCCCT ATGAGCGGCA GGACGACAGC
GCGCTTGCCG ATACGCCCTA CCCGCTCACC AATATTCCGC AGCCGAAATT CGAGGCGGCG
CTGGCGAAGG CGATTGAGGC CGAGCCGCTC ATCACCTTTA CACGCGGCAT CGCCTGCACC
GGTCTCGTGG AAGTGCCGGA CGGGGTGACG GCGCAACTGG AGGCGGAAGA CGGCAGACGC
GACACCCTCA CCTGCGACTA TCTCATTGCG GCGGACGGCG CGGGATCGCG GTTGCGCGAC
ATGCTCGGCA TCGCGATGGA GGGGCCGGAG GTGCTGCAGC ACAATCTGAT GATCCATTTC
GAGGCCGATC TCCGCGCGCT CACCGATGCG CGGCCCGGCG TTCTCTATTT CCTGTTCCAG
CCGGGCACGA GCGGCGTCTT CATCGCCTAT GACCGGGGCA GGACATGGGT GCTGATGCAT
CCGCACGATC CGGCGACGGA GCCGCGCGAC AGTTTCGACG AGGCGCGATG CGGCCAGTTG
ATCGAAGCGG CGATCGGCAC GACGCCGCCC GCCCTCAAGA TCCGCCATGT GAGCCCGTGG
ACGATGTCGG CGCAGGTGGC GGAATGCTAT CGCAAGGGAC GTGTGTTTCT CGCCGGGGAC
GCGGCGCACC GCTTTCCGCC GACGGGCGGG CTTGGCCTCA ACACGGGCGC GGTGGATACG
CAGAACCTTG CCTGGAAACT TGCCGCGGTG CTGAAAGGCG AAGCGGGAGA GGCCCTTCTC
GACACTTACG AGACGGAACG GCGGCCCGTG GCGCAGGTGA ATTGCGAACA GAGCCTGACC
AATGCGTCGA AACTCTTCGA GCTCTTTGGC GCGCTTTACG GCCGCGACCC GGCGCGGATG
CAGGCGCATT ACGAAGCCGT CGCCGCGAAC CCGAAAGCTT CCGCCGAACT TGCCGCCGCC
GTGGAAGCGC AGCGGCCGCA TTTCGACAGT TTCAACCTGC AGCTCGGCTA TCGCTATGCC
TCGGCGGCGA CCATCGGCGC GCCTGCGCTG CAGGCGGCGG CGGGCGTCGA TATCAGCGAT
TACCGGCCCT GCTGGGAGGC GGGCGCGCAT GTGCCGCACC GCCTGGTGAA GACAAGGAGC
GGCGAGCGCG TATCGCTGCT GTCGCTCCTC GCCGCCGACC GCTTCGCGAT ACTGGCAGGA
CCGGGGGGGA CCAGCTGGCG CGAAGCGGCG GCGGCAACGG GCCTGACGGC GCTGCGCGGC
GGATGGGACT TCGAGGACGA GGCGAAGGGC TGGACGGAAC TTACCGGCCT GCCGAAGGAC
GGCGCGCTGC TGGTGCGGCC GGATGGACAT ATCGCCTGCC GCTTCGAGGG CGGAACGGAG
AATGCGGCGG CGCTTCTCGG AGAGGCGCTG GCGCAGGTTC TGGCGCGATG A
|
|---|
| Protein sequence | MSRIPVLIAG AGPVGQLSAL LLARQGIASR LIDRRPRPAE APKAHAVNPR TLEICESVGV
SAEGLRREGA SANDAGWVRF VGTLTGTEFG ALPYERQDDS ALADTPYPLT NIPQPKFEAA
LAKAIEAEPL ITFTRGIACT GLVEVPDGVT AQLEAEDGRR DTLTCDYLIA ADGAGSRLRD
MLGIAMEGPE VLQHNLMIHF EADLRALTDA RPGVLYFLFQ PGTSGVFIAY DRGRTWVLMH
PHDPATEPRD SFDEARCGQL IEAAIGTTPP ALKIRHVSPW TMSAQVAECY RKGRVFLAGD
AAHRFPPTGG LGLNTGAVDT QNLAWKLAAV LKGEAGEALL DTYETERRPV AQVNCEQSLT
NASKLFELFG ALYGRDPARM QAHYEAVAAN PKASAELAAA VEAQRPHFDS FNLQLGYRYA
SAATIGAPAL QAAAGVDISD YRPCWEAGAH VPHRLVKTRS GERVSLLSLL AADRFAILAG
PGGTSWREAA AATGLTALRG GWDFEDEAKG WTELTGLPKD GALLVRPDGH IACRFEGGTE
NAAALLGEAL AQVLAR
|
|---|
| |