Gene Plav_0116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0116 
Symbol 
ID5453353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp127564 
End bp128388 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content67% 
IMG OID640875676 
Producthypothetical protein 
Protein accessionYP_001411396 
Protein GI154250572 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.330077 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCA TTCCACCGAA CCACCCGCTC GATATCGCCA TGCGGCTGAC GCCCACCGAT 
GACGGGCGGC TCAAGGGCAC GACCTCCGAC GAGTACTGGA ACATGATGGG GCCCTTCGGG
GGGACGACCG CATCGCTGAT GCTGAAGGCG GCGCTCGATG CGCCCGCGCG GATCGGCGAT
CCGGTGGCGC TCACCGTCAA TTTCTGCGCC CCGATCGCCA AGGGGGATTT CTTCATCGAC
CTCAAGGAGA CGCGCACCAA CCGCTCGACG CAGCACTGGT CCATGGAGCT TTCGCAAGAG
AACGGCATCG CCGCGACGGC GACGGCCGTA TTCGCCAAGC GGCGCGAGAC CTGGGCGTAT
CAGCCGGCGG CGATGCCCGC GATCCCGCCG CACGAAACGC TGGCGCCGAT GAATACGGAA
GGCCGCAATG CCTGGCTGTC GCGCTACGAT CTGCGCTTCG CGGAGGGGGC GATGAACTTC
GAGGCACGGG CGGATGACGA CCCCGCCCCT TCGCGTTCGC TGCTCTGGGT GGCCGACAAG
CCGGCGCGCC CGCTCGATTT CGTTTCGCTC GCATCGCTCG CCGATACGTT CATCGTCCGC
ATCTTTCTCG TGCGCGGCCG CATGGTGCCG GCGGGAACCG TTTCGCTCAC CACCTATTTC
CACACCGACG CGGCGGGGCT GGCGGCGCAG GGCGATGCGC CGCTGGTGGG CATGGCGGAC
ACGAAAACAT TCCGGCAGGG CTATTTCGAT CAGTCGGCGG AGCTTTGGGG CGGCGACGGG
CGGCTTCTCG CGACGAGCGT GCAGACGGTC TACTTCAAGG AGTAG
 
Protein sequence
MNAIPPNHPL DIAMRLTPTD DGRLKGTTSD EYWNMMGPFG GTTASLMLKA ALDAPARIGD 
PVALTVNFCA PIAKGDFFID LKETRTNRST QHWSMELSQE NGIAATATAV FAKRRETWAY
QPAAMPAIPP HETLAPMNTE GRNAWLSRYD LRFAEGAMNF EARADDDPAP SRSLLWVADK
PARPLDFVSL ASLADTFIVR IFLVRGRMVP AGTVSLTTYF HTDAAGLAAQ GDAPLVGMAD
TKTFRQGYFD QSAELWGGDG RLLATSVQTV YFKE