Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0116 |
Symbol | |
ID | 5453353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 127564 |
End bp | 128388 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640875676 |
Product | hypothetical protein |
Protein accession | YP_001411396 |
Protein GI | 154250572 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.330077 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCCA TTCCACCGAA CCACCCGCTC GATATCGCCA TGCGGCTGAC GCCCACCGAT GACGGGCGGC TCAAGGGCAC GACCTCCGAC GAGTACTGGA ACATGATGGG GCCCTTCGGG GGGACGACCG CATCGCTGAT GCTGAAGGCG GCGCTCGATG CGCCCGCGCG GATCGGCGAT CCGGTGGCGC TCACCGTCAA TTTCTGCGCC CCGATCGCCA AGGGGGATTT CTTCATCGAC CTCAAGGAGA CGCGCACCAA CCGCTCGACG CAGCACTGGT CCATGGAGCT TTCGCAAGAG AACGGCATCG CCGCGACGGC GACGGCCGTA TTCGCCAAGC GGCGCGAGAC CTGGGCGTAT CAGCCGGCGG CGATGCCCGC GATCCCGCCG CACGAAACGC TGGCGCCGAT GAATACGGAA GGCCGCAATG CCTGGCTGTC GCGCTACGAT CTGCGCTTCG CGGAGGGGGC GATGAACTTC GAGGCACGGG CGGATGACGA CCCCGCCCCT TCGCGTTCGC TGCTCTGGGT GGCCGACAAG CCGGCGCGCC CGCTCGATTT CGTTTCGCTC GCATCGCTCG CCGATACGTT CATCGTCCGC ATCTTTCTCG TGCGCGGCCG CATGGTGCCG GCGGGAACCG TTTCGCTCAC CACCTATTTC CACACCGACG CGGCGGGGCT GGCGGCGCAG GGCGATGCGC CGCTGGTGGG CATGGCGGAC ACGAAAACAT TCCGGCAGGG CTATTTCGAT CAGTCGGCGG AGCTTTGGGG CGGCGACGGG CGGCTTCTCG CGACGAGCGT GCAGACGGTC TACTTCAAGG AGTAG
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Protein sequence | MNAIPPNHPL DIAMRLTPTD DGRLKGTTSD EYWNMMGPFG GTTASLMLKA ALDAPARIGD PVALTVNFCA PIAKGDFFID LKETRTNRST QHWSMELSQE NGIAATATAV FAKRRETWAY QPAAMPAIPP HETLAPMNTE GRNAWLSRYD LRFAEGAMNF EARADDDPAP SRSLLWVADK PARPLDFVSL ASLADTFIVR IFLVRGRMVP AGTVSLTTYF HTDAAGLAAQ GDAPLVGMAD TKTFRQGYFD QSAELWGGDG RLLATSVQTV YFKE
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