Gene Fnod_1672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1672 
Symbol 
ID5451751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1821486 
End bp1822718 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content36% 
IMG OID640875441 
Productphosphoribosylamine--glycine ligase 
Protein accessionYP_001411164 
Protein GI154250339 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0151] Phosphoribosylamine-glycine ligase 
TIGRFAM ID[TIGR00877] phosphoribosylamine--glycine ligase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.561009 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAATT TAAAGGAGAA AGTAAAGAGG ATTTGCATAC TTGGAAGCGG TGGTAGGGAA 
TACGCAATAG GATGGGCATT TAAAAAATTT GGATTTGATG TGTATTTTTA TCCCGGTAAT
GCTGGAACAA AAAATATAGG AAAAAATATT CAAATAAATA ACTTTGACGA ATTGAGCAAT
TTTGATATGG TCATTCCTGG CTCTGAAGAG TTCTTAGTTA AAGGCATAGC GGATGGAAAA
GCAAATGTTT TTGGACCTGA TTCAAAAGGT GCGCGATTAG AAGGTTCAAA GTGCTTTGCA
AAGACGTTTA TGAAAAAACA CGGCATTCTA ACCGCAAATT TTCAAATAGC AACTGACGAA
ATATCTCTAT ATGACGCTCT AAAAGCATTC AAACCGCCTT ACGTGATAAA AGCCGATGGC
CTTGCACAAG GTAAAGGTGT CGTAATCTGC GACACTTTCG ATGAAGCTAT GGATATTGGG
CAAAAACTAA TCAAAGGGCA ACTGATACCG AATGTAAAAG GTCCAGTAGT TGTGGATGAA
TTTTTAAAAG GTTGGGAACT TTCGGCAATA GCAATTGTAA ATGGTACAGA TTTTGCTTTG
CTACCATTTA CAAGAGATTA TAAACGCGCG TTTACAAACA ACGAAGGGCC CAATACAGGT
GGTATGGGGG CATTTGGTCC TGTTGAAATT GATAGCAAGT TGAAAGAGAA AATCAAAAAT
CTATTTTCAA AAACCCTTAA CGGTTTAAAA GAAGATGGCA TATATTACCG TGGTTTTCTC
TACATAGGCT TGATGATTGT AAATGATGAA CCTTATGTCT TAGAATACAA TGTTAGATTA
GGCGATCCGG AAACTGAAGT AATTGTCGCA ATGGATCCAG GAAAATTTGT TGAAAATATA
TTAAAAGCAT TTAATAATGA AAGATTCGAA GAATACACAC CAAATAATTA TTCTGTAGAT
GTTGTTCTGG CATCGCAAGG ATATCCTGAA AATCCTATGA AAGGTCAGGA AATCTATATA
GAACACGATG AATGCGAAGA CTGGATGATA TTTTACGCAG GAGTTACTGA AAAAGATGGA
AAATTACTCG TTAATGGTGG AAGAGTCTTG CATTCAATTG GCATTGGAAA AACACTTTCC
CAGGCACGTG AGAAAGCATA TAGAAATATA GAAAAAGTGA AATTCGAAGG AATGTTTTAC
AGAAACGATA TAGCGCTTTA TCAAGGAGAG TGA
 
Protein sequence
MENLKEKVKR ICILGSGGRE YAIGWAFKKF GFDVYFYPGN AGTKNIGKNI QINNFDELSN 
FDMVIPGSEE FLVKGIADGK ANVFGPDSKG ARLEGSKCFA KTFMKKHGIL TANFQIATDE
ISLYDALKAF KPPYVIKADG LAQGKGVVIC DTFDEAMDIG QKLIKGQLIP NVKGPVVVDE
FLKGWELSAI AIVNGTDFAL LPFTRDYKRA FTNNEGPNTG GMGAFGPVEI DSKLKEKIKN
LFSKTLNGLK EDGIYYRGFL YIGLMIVNDE PYVLEYNVRL GDPETEVIVA MDPGKFVENI
LKAFNNERFE EYTPNNYSVD VVLASQGYPE NPMKGQEIYI EHDECEDWMI FYAGVTEKDG
KLLVNGGRVL HSIGIGKTLS QAREKAYRNI EKVKFEGMFY RNDIALYQGE