| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1500 |
|---|
| Symbol | |
|---|
| ID | 5452117 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | - |
|---|
| Start bp | 1630477 |
|---|
| End bp | 1631334 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640875273 |
|---|
| Product | phosphatidate cytidylyltransferase |
|---|
| Protein accession | YP_001411000 |
|---|
| Protein GI | 154250175 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0575] CDP-diglyceride synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGAAA CAATTGAAAA AAACACCAAT TCTCAGAAAA ATCTAAAAAA GGAAACGATT
CAAAGATTCA TAAGCGCTAT TATAGTTGCT CCATTCGTTG TATTGTGCTT TATATCTTAC
AGCAGTTTAG TAGGATTAGT CGCAACGATA GTTATGATAA CATCGAGTGA GTTGTTTTTC
ACAACTATAA AACGCCATAG TACTTGGCTT TCGTTTACAT ACACAGCCAT CGTAACGGTT
TATCCGATAT TGTACGGTGT TGCTTTTAGA AATCATCCCA TGGAACTTCT TGCCGTAATT
TATATGACTG GAATAATTGT AGCACTTTAT AAAATCAAAA ATCGGGAAAT TATAACGGAA
GTTTATTTCG CATATTCAAC TGCTTTAATA TACATATCAT TTTTGCTTTC TTTCTTTATA
CCACTCTACG ATATCTATGG ACCAGCAATT GCTTTGCTAA CTTTAACGCT CTCTTGGTCT
TACGATAGTT TTGCCTATGC ATTCGGTATG TTATTTGGGA AGCACAAATT CGGAAGCCAT
TACAGTCCAA ACAAGAGTTG GGAAGGTTTC TTTGGTGGTA TTGGTGGAAC ATTTGTTTAT
ATAATTATCT ATCAGATAAT TGCGAACACA TTCTTCCACT CAGAAATGAA ATTAACATTT
TTTTTGGAAC TTTTAATCGC TTTTCTTACA GGATTAATGG ACTCTTTTGG TGATATATTC
GAATCATCTA TTAAGAGACA TTACAATGTC AAACATATGG GAAATTTAAT GCCGGGTCAT
GGTGGAATGT TGGATAGAAT CGATGGTTTG CTCTTTATCA CTCCAGTTGT CTATATTATT
TTAAAACTTT TCTATTAA
|
|---|
| Protein sequence | MPETIEKNTN SQKNLKKETI QRFISAIIVA PFVVLCFISY SSLVGLVATI VMITSSELFF
TTIKRHSTWL SFTYTAIVTV YPILYGVAFR NHPMELLAVI YMTGIIVALY KIKNREIITE
VYFAYSTALI YISFLLSFFI PLYDIYGPAI ALLTLTLSWS YDSFAYAFGM LFGKHKFGSH
YSPNKSWEGF FGGIGGTFVY IIIYQIIANT FFHSEMKLTF FLELLIAFLT GLMDSFGDIF
ESSIKRHYNV KHMGNLMPGH GGMLDRIDGL LFITPVVYII LKLFY
|
|---|
| |