Gene Fnod_1475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1475 
Symbol 
ID5452201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1598869 
End bp1599531 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content36% 
IMG OID640875248 
ProductL-serine dehydratase, iron-sulfur-dependent, beta subunit 
Protein accessionYP_001410975 
Protein GI154250150 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1760] L-serine deaminase 
TIGRFAM ID[TIGR00719] L-serine dehydratase, iron-sulfur-dependent, beta subunit 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGATTAC TTGAAGTTTC AGGGCCAGTG ATGACGGGGC CATCAAGTTC ACATACATTA 
GGTGCTTTAA AAATTGCAAG GTTTGTCTAT AAATTAATGG GAATACCTGA GCATGTTGTG
TTTGCAATGC ACGGTTCTTT CGCATTAACT TACCGTGGGC ATGGCACGGA TAGGGCTTTG
CTTGCAGGGG TTTTGGGGAT TAAACCAGAT AGCCCAGATG TTAAAGAAGC TTATAATATC
GCAAAAATGT ACGGTCTACA ATATGAATTT GAGGTACAAG ATCTAGGAGA TGTACATCCT
AACACCGTTC TTATAAAAGC TTGGAAAGAT AATATATACA ATGAAATTGA AGGTTCTTCT
ATTGGTGGAG GAGCGATAAA GATAACAAAA ATCAATGGTG TGGAATGCCA ACTTACCGGC
GATTTTCCCA CACTGGTAAT TGTAAATAAA GATAAACCAG GCGCCTTAAA GGATATACTT
GATTGTATAA AAACAAACAT AGCAAATGTT TATTTAAGAA GAATAAACGC TTTACAAGCT
ATAGCATTGA CGATAATAGA ACTCGATGAA AACGCTAGTG ATGATGTTTT GAAATGTTTG
AAAAATCTAA ATAACGTTCT TGAAGTTTAC AATGTTAGAA TCGAAGAAGG TGAAGTAATA
TGA
 
Protein sequence
MGLLEVSGPV MTGPSSSHTL GALKIARFVY KLMGIPEHVV FAMHGSFALT YRGHGTDRAL 
LAGVLGIKPD SPDVKEAYNI AKMYGLQYEF EVQDLGDVHP NTVLIKAWKD NIYNEIEGSS
IGGGAIKITK INGVECQLTG DFPTLVIVNK DKPGALKDIL DCIKTNIANV YLRRINALQA
IALTIIELDE NASDDVLKCL KNLNNVLEVY NVRIEEGEVI