Gene Fnod_1439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1439 
Symbol 
ID5452326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1560039 
End bp1561022 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content32% 
IMG OID640875211 
Producthistidine kinase 
Protein accessionYP_001410939 
Protein GI154250114 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0850045 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAATGA GCGATTATGA TAAGGACTTT GTAAGGGTAC TATTAAACAA TTTAGAAGAA 
GCGATCTTTT TACTCGATAA AACAACTATC ACATTTGCCA ATGAAATGGC AAAAAGTTTT
TTTGGCCCAA GCGAAGGTAT GGATATTTTT GACTTGCTTA TATTTGAAAA GTCTACTTTA
TTAGTGGATT CAATACATGA ACGTAAACCA TTGAATATCG AATCAAAAGT ATTTCTCAGT
AAGAAAGGCG GCTGGTGTGA TTTTTACATT AGATACATAC CAGAAATAGA AGCCTTATTA
ATGAGAGATG TATCTTTTAT AAAAATTATC GAAGAGGCTA AATTAAACAT GTCTGTTCTT
ATCTCGCATG AGTTAAAAAA TCCGTTGGGA GTTATTGAAA GCATTGTTTC TGATATGCTT
GAAAACGAAG AAGATGAAGA AAAAATAGAA AAATTATGGA AAATAGAAAA ACAGTCCAAA
AGGCTTAATA GAATTATCCA ACAGATTGAG TATATAACTA TGGCACAACT TGGTCTTTAC
GTTCCAAGAA AGGAAACTTT AAATGTCCAG AAAATTATTT CAGAAGTTAT GGAAGAAATC
GAAGAGTTGA GGAAGAAAAA AGAAATAGAA ATTTCCATAA ATCTTGAGAC TAAAACGATA
GAAGCTGATG GATTCATAAT TCGAACAATC CTTAAAAATT TACTTTCAAA CGCTTTAAAA
TATTCTTTCG AAAAGTCAAA AGTTATTCTC GAGTTTAGTG CTGAAAGAAT GAGTATTCAA
GACTTTGGTA TTGGTGTGCC AGATTCTGAG AAGGAAAAGA TATTCGGTAG GTTCTATAGA
ACACCAAGTG CGGTAAAAAT GGCCTCTGGT TCAGGATTGG GATTAGCGGT TGTTAAGCAT
CTTGCAAGTA TTGCAAATTA CAAAATTGAA TTTGAATCAC AACACCTTAT AGGAACAAAG
GTGATAGTAT GGTTTGGAGA GTGA
 
Protein sequence
MKMSDYDKDF VRVLLNNLEE AIFLLDKTTI TFANEMAKSF FGPSEGMDIF DLLIFEKSTL 
LVDSIHERKP LNIESKVFLS KKGGWCDFYI RYIPEIEALL MRDVSFIKII EEAKLNMSVL
ISHELKNPLG VIESIVSDML ENEEDEEKIE KLWKIEKQSK RLNRIIQQIE YITMAQLGLY
VPRKETLNVQ KIISEVMEEI EELRKKKEIE ISINLETKTI EADGFIIRTI LKNLLSNALK
YSFEKSKVIL EFSAERMSIQ DFGIGVPDSE KEKIFGRFYR TPSAVKMASG SGLGLAVVKH
LASIANYKIE FESQHLIGTK VIVWFGE