Gene Fnod_1396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1396 
Symbol 
ID5451615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1505261 
End bp1505539 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content34% 
IMG OID640875171 
ProductCRISPR-associated Cas2 family protein 
Protein accessionYP_001410899 
Protein GI154250074 
COG category[L] Replication, recombination and repair 
COG ID[COG1343] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR01573] CRISPR-associated endoribonuclease Cas2 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAGGA GAATACTGCT TGTTTATGAC GTCAACGAAA AAAGAGTGGC AAAAGTTCAC 
AGATTGTTAC TAAGATACTT AGTATGGCGG CAGAACTCAA CTTTCGAAGG AAAACTAACC
AATGGCGCTA TAAAAGAAAT GATAAGAAAA ATATCAAGAT ACATAAAACC TGAAGAAAAT
GATGGGGTTG CGATATATTA CCTTTCCTCA AAAGACAGTG TAACAGTAGA AATTCTTGGA
ACTGACAAAG GAAACAAATT CTCGAACTTT ATAGAATAA
 
Protein sequence
MSRRILLVYD VNEKRVAKVH RLLLRYLVWR QNSTFEGKLT NGAIKEMIRK ISRYIKPEEN 
DGVAIYYLSS KDSVTVEILG TDKGNKFSNF IE