| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1354 |
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| Symbol | |
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| ID | 5452356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 1458449 |
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| End bp | 1460008 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640875130 |
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| Product | WD-40 repeat-containing protein |
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| Protein accession | YP_001410858 |
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| Protein GI | 154250033 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAGAA GTCCATTTCC TGCTATTTTC GTCTTCGTTA TTTTGCTGAC AACACTTTCA
TTCCCCCTCG ATTTCGTCCT CTTTGGTCAC AAAGATGCCG TTTGGGAGCT CCAAACAGAC
GGTAATTTGA TTTATTCAGT AAGCGCAGAT GGAACGTTAA AAGTGTGGAG TAAGGAGCTC
GTGCTCCTAA ACACAGTTAC AACTCACAGT AGCTGGGCAA GGTGCGTTGC GCTGAGTGAT
AAATATATAG CTGTTGGAGG GTATAAGCCA GATAATGAGA TTAGGGTGTA CGATAAATCG
AACCTAAAAT TCCTCTATAC GTTAAAGGGG CATACAGCTT CTGTTTTTAC GCTATCTTTC
TACAAGAACT ATCTGTTTTC AGGCGGTTCG GACAACAGTA TCTTGGTATG GAAAGATTTC
AAGCTTTTTA AACGTTTGAA GTACCACGAT GCGTGGGTAC GCAAGATCGT TGTCTTTGGT
GATTTCTTAG TCAGCGGAGA TGAGAATGGG CGTGTTGTTT TTTCCAACAT AGCTGATTTT
TCTTTGGTGA AAATGTTCGA GTTGGGTTCT ATGGTTAATG CGATGAGTAT TATGGAGAGT
TCTCTCATCG TGGGAACAGC AAATGGTACT GTTTATGAGT TTCAGATAGT TGGCAGGGAT
GTTAAATACA GAAAGGTACT TTCTTTGGAT TCACCTGTCG AGGCAATCGA TAGTCAAGGT
AACTATCTTT ATGTTTCACA GTTGGGCAGT GTTTTTTTAT TTGAGAAGAA AGCTGGATCT
TTTAAGAAGA TGCGTAAGAT TAATGTTTCG CCATCGGAGG TAAGTACTCT GAAGGTTGTT
GGAGCAACGA TTTTTGCAGG CAACAGGCAG GGGGAGATAT ATTCATATTC AATTACGGGT
GATTATAAAG CTAAGTCGCC AAGGCATTTC TTCTCTTCAG CCAAGATAAT AAAATCCTAC
AAGAATAATG AACTTATCGT TGCAAGGGAA AATGGAAATG TTGAGAATTA TTCCATTCAA
ACGGGTTTGC TTAAATGGTC ATACAATATA GGCACATCTG CACGATTCGT TGCTGAGGCA
AAGGATGAAA TCGTAGTCGG CTCAGGCTCT GGAAAGCTCT TTTTATTGAA AGGCGGAAAA
TTGACTGCGT CTATCGTAAC TGAAGACGCT TTAATCAGTT ACCTAAAGCT CAAAGATAAT
CTCTTTTACG TAGGCTCACT CGGAAAAGTC TATTTGCTCG AGAAAACAGA CAGGTGGAGC
ATTAAACCTG TCTTAAAACT CGAGGGCGAG TGGATAACGG CTCTATCATA CAGTGGCAAT
GTGATATACA TAGGCACAAA CGCGGGAAAT GTATACACTT TTGATACAAA AAACGGAAAG
GCTTCGAGAA TTTACAACTA TCCAAGTTGT GCTGTTTCTA TCTTGATGGT GAATAGCAGT
CTTTATGCTT TCTTCTTCGA TGGCAAATAC GCTATCTTTG ACGGCAAGAG CTGGCAGCTC
AAGAATTCCG AAATTTCTCC ACTCTACAGT GTATATTTAT CCGGAAAAGA TCTCGTATAA
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| Protein sequence | MKRSPFPAIF VFVILLTTLS FPLDFVLFGH KDAVWELQTD GNLIYSVSAD GTLKVWSKEL
VLLNTVTTHS SWARCVALSD KYIAVGGYKP DNEIRVYDKS NLKFLYTLKG HTASVFTLSF
YKNYLFSGGS DNSILVWKDF KLFKRLKYHD AWVRKIVVFG DFLVSGDENG RVVFSNIADF
SLVKMFELGS MVNAMSIMES SLIVGTANGT VYEFQIVGRD VKYRKVLSLD SPVEAIDSQG
NYLYVSQLGS VFLFEKKAGS FKKMRKINVS PSEVSTLKVV GATIFAGNRQ GEIYSYSITG
DYKAKSPRHF FSSAKIIKSY KNNELIVARE NGNVENYSIQ TGLLKWSYNI GTSARFVAEA
KDEIVVGSGS GKLFLLKGGK LTASIVTEDA LISYLKLKDN LFYVGSLGKV YLLEKTDRWS
IKPVLKLEGE WITALSYSGN VIYIGTNAGN VYTFDTKNGK ASRIYNYPSC AVSILMVNSS
LYAFFFDGKY AIFDGKSWQL KNSEISPLYS VYLSGKDLV
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