| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1284 |
|---|
| Symbol | |
|---|
| ID | 5453220 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | + |
|---|
| Start bp | 1386993 |
|---|
| End bp | 1388201 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640875060 |
|---|
| Product | adenylosuccinate synthetase |
|---|
| Protein accession | YP_001410788 |
|---|
| Protein GI | 154249963 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0104] Adenylosuccinate synthase |
|---|
| TIGRFAM ID | [TIGR00184] adenylosuccinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATAG TCTGCTATGG ATTACAGTGG GGGGACGAAG GAAAAGGAAA AGTTACGACA
TATCTTTCAA GAGAGTTTGA CTACGTTGTA CGGTACAGTG GTGGAAGCAA CGCAGGTCAT
ACTGTTAACT ACGGTGAATT TAAACTTGTC CATCACCTCG TACCATCTTT TGATATAAGA
GGAAATACCA AAGCTTACAT AGCAAATGGT GTTGTCGTTG ATCTTGATGT TCTTATTAAA
GAAATCGAAG AAATTAAAAA AATTGGTTTT GATGTATACG ATAGGATAAA TATTTCATCA
CTTACTCACA TTGTTTTACC GGTTCATAAG ATGTTAGATG AAAAATTAGA AATTGCGAAA
GGCGAAAAAG CTGTAGGGAC AACAAAACGT GGTATAGGCC CTGCTTACGC CGATAAAGTG
CATAGGATTG GTCTAAGATT GGTTGATTTA TTTGATAAAG AAACAGCTTT AGAAAAATTA
AAATTCATTT CCAAGATGTA TAAAAATCTT TACGGTATAG AATGGGACGA TTATGAGATA
CTCTTTGAAA ATTTTGAGAA ATTATCAAGA ATTATAGTTC CTCCTCTTGA GATGAAGGAA
GAATTAAAAA ATGCTAATGT TCTTTTTGAG GGAACTCAGG GTGTTTTACT TGATATAGAT
ATGGGAAGCT ATCCATATGT AACAGGTTCT TATTGTAATA CAACAGGCGT GGAAAGTGGA
CTGGGCTTTC CAATAAAAAT TGACAAACGA ATAGGTGTGT TTAAAGCATA TGTAACGCGT
GTTGGTAAAG GTCCATTTCC AACAGAACTA TTTGGTGAAG AAGCCGAAAA GATTAGAATA
GCTGGTAGAG AATTTGGTGC TACTACAGGT AGACCAAGGA GATGCGGATG GCTTGATTTG
CCAATATTGA GGTACGCAAT TGAAACTTCT GGTTGCGATG AAATGATAAT GACAAAAGCA
GATATATTAT CTGGATTGGA AAAAGTTAAA GTTGGAATTA GATATCTATC GAATGGGAGA
AAGTTTGAAA TCCCTAATGA TATATCTATG ATAGATAAAG TCACTGTTGA ATACATCGAG
TTTAACGGTT GGAAAAATCT TGAAGATGAC AATTTTGCTA AATTTGTAGA TTTTATTGAA
AGAGAAACGG GTTTAAAAAT TGCCTATATA TCTACTGGTG AAAAAATTGA TGATATCAGA
AAGGTCTGA
|
|---|
| Protein sequence | MNIVCYGLQW GDEGKGKVTT YLSREFDYVV RYSGGSNAGH TVNYGEFKLV HHLVPSFDIR
GNTKAYIANG VVVDLDVLIK EIEEIKKIGF DVYDRINISS LTHIVLPVHK MLDEKLEIAK
GEKAVGTTKR GIGPAYADKV HRIGLRLVDL FDKETALEKL KFISKMYKNL YGIEWDDYEI
LFENFEKLSR IIVPPLEMKE ELKNANVLFE GTQGVLLDID MGSYPYVTGS YCNTTGVESG
LGFPIKIDKR IGVFKAYVTR VGKGPFPTEL FGEEAEKIRI AGREFGATTG RPRRCGWLDL
PILRYAIETS GCDEMIMTKA DILSGLEKVK VGIRYLSNGR KFEIPNDISM IDKVTVEYIE
FNGWKNLEDD NFAKFVDFIE RETGLKIAYI STGEKIDDIR KV
|
|---|
| |