| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1280 |
|---|
| Symbol | |
|---|
| ID | 5452367 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | - |
|---|
| Start bp | 1382750 |
|---|
| End bp | 1383499 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640875056 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001410784 |
|---|
| Protein GI | 154249959 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2122] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCAA GTAAAATTCC TATTGTTAAA AGGTTTTACA GGGAAAGTTA TTCAAAAGAT
ATCACAGGCT TTTTTGTTAA GTACAAGTAC ACGGATATCT GGGTAGGAGT TGACAATTTT
GACCTTGAAA TGCTCGATTT TACGTATGAA ACTGTGAAAA GACTTTACAA TGAGTTGGAA
GACTATATAA GGAAAAATAA GGAATTTAAA ACTTCTTTGG TACCTATTGG ATATGATGGC
AATGCCCCAG AAATTGCTAA AAAAATGATA GAAGCTTCAA ATACTGCCGG TGTAGGTCCG
ATGGCATGTG TAGCTGGTGC CTTTTCTCAG TTGGTTGGTA AAAATTTGAT TGAGAAGTAC
AAAAGTAAAA AAGTTATCGT TGAGAATGGC GGTGATATAT ACATCAATTC GTTCGATGAA
ACAAGAATAG GAATATTCTC CAACTTTGAT AGTGAATTTA ACCGATTGTC TATAGTTCTC
AGTTCTGGAG AATTTGGTGT GTGTAGTTCA TCTGGAAAGA TAGGTCATTC TCTTAATTTT
GGTAATGCGG ATATCGTTAC AGTTATAGCC AAAAACTCAC TAATAGCAGA TGGATTTGCA
ACTAAACTTT CAAATATGGT AAAAATAAGC GGAGATATTA CAGATGTCTT GGAATACACA
AAAAGTTTTT TGGAAGATGT AATATATGGG GTAGTAATTA TAATTAATGG AAAAATGGGA
GTTATAGGGA ATGTGAGGTT CGAAATATAG
|
|---|
| Protein sequence | MKSSKIPIVK RFYRESYSKD ITGFFVKYKY TDIWVGVDNF DLEMLDFTYE TVKRLYNELE
DYIRKNKEFK TSLVPIGYDG NAPEIAKKMI EASNTAGVGP MACVAGAFSQ LVGKNLIEKY
KSKKVIVENG GDIYINSFDE TRIGIFSNFD SEFNRLSIVL SSGEFGVCSS SGKIGHSLNF
GNADIVTVIA KNSLIADGFA TKLSNMVKIS GDITDVLEYT KSFLEDVIYG VVIIINGKMG
VIGNVRFEI
|
|---|
| |