Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_1204 |
Symbol | |
ID | 5451801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 1296820 |
End bp | 1297221 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640874980 |
Product | hypothetical protein |
Protein accession | YP_001410708 |
Protein GI | 154249883 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00605175 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAAAAG GGTTTACACT CATCGAATTG TTAATAGTTC TTTCAATAAT CGCTGCACTG ATGTCGGTAG CAACACCTGT AGGTATTAAT GCTCTTGCCC AAGCAAAAGC AACAAATGTT GCTGGAAATT TTAGAACACT CTATCAAGCT GTTGTTCAAA TGTTAATGTT AGAACAAAAT CCACCCACAA GTGGTGATAT ATTAGATTAT CTTGTAAAGA ATAATTACAT ATCAACTAAA CCGAATGGAT TTGAAATAAC TTATAAAGTT GAGAATGGTA AAGAATTTTA TAGGATACGT TACATAAATT CAGACGTAGA TGTGCTTAAG GTAAAATCCG TAAACACAAT GATAAGCTTG GATGAATCCA ATAAACTTAT AATAGATATA CCGAGAAAGT AA
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Protein sequence | MKKGFTLIEL LIVLSIIAAL MSVATPVGIN ALAQAKATNV AGNFRTLYQA VVQMLMLEQN PPTSGDILDY LVKNNYISTK PNGFEITYKV ENGKEFYRIR YINSDVDVLK VKSVNTMISL DESNKLIIDI PRK
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