| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1180 |
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| Symbol | |
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| ID | 5452299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 1269727 |
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| End bp | 1271673 |
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| Gene Length | 1947 bp |
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| Protein Length | 648 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640874951 |
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| Product | glycoside hydrolase family 13 protein |
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| Protein accession | YP_001410684 |
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| Protein GI | 154249859 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGGTT ATAAGCTACT CATAGTTTTA GTTATTTCAG TTTTGCTAAT ATCTGTTACT
TCAATCTTTG CGGGTGTAAA GTTTGTAAAT GGCAAAGTTG TCTTTACTTT CAAAGCCGAA
GCCAACGTTG TATATCTGGC AGGTAACTTT AACAATTGGA ATCCAACCGC TTGGCCTATG
AAACTTACCG ATGGTGTTTG GACTTACGAA GTTGAACTTA AACCTGGTAG TTATCAGTAT
AAATACGTAA TAGATGGCAA AACTTGGAAA GAAGATCCTG AAGCTCCTGC GTATGTGGAC
GACGGGTTTG GTGGAAAAAA TGGAGCATTC ACATTGACAG CTGATGGAAA AATCCTTGGT
GAACAAGGTA CACAACAATC CCAAGGCAAG AAATACGAAT TGAATGAAAA ACGAGAGAAC
ACAATATTCG TTGACCCAGA TGGATACGTT GTGATAAGGA TAAATGCACC AGGTGCCAAG
CATGTTTTCA TAGCAGGTTC ATTCAATAAT TGGAACGATA AAGATACCGA ATGTTATTAT
GTCGATGCTG GTTGGTGGGA AGCAGTTTTA GAATTGTCAC CTGGAATTTA CGAATATAAG
TTTATAATCG ATGGAAATTG GACAGTAGAT CCAAATGCGT TTGGGTATAC AGATGATGGT
TTTGGTGGAA AAAATGCTGT CCTCGAAGTT GCGAAAGAAG GCGGAAAATT AATCGTTAGA
GCTCCTCAAA ATGCTACAAA ATCTGAAGGA GCAAAGGAGG AAAAAACACA AGAGCAAGTA
ACTACAGCTG AAACAGTAAA ACCAGGATTA TCTATAGATG GAAATAAAGT TATCTTCGCC
GTTAAAAAAG AAAATGCCCA AGAAGCTTAT CTTGCAGGTT CATTCAACAG TTGGAATCCA
AAAGCATTGA AAATGCAACT TGTAAACGGA TACTGGGTTG CCAGCTTAGT ATTACAACCA
GGAACTTACG AGTATAAATA CGTCTTTTTA ATTGGTGGAA ACTATGTATG GGAAGAAGAT
CCAAATGCAC CAGGTTATAA ATCAGACGGT TACGGCGGAA AAAATGGAAT TTTCAAACTT
GTCCAAAAAG ATGGAAAGAT TTCTATAGAA GAACTACAGC AAACAGCGGG TGGTTTACCC
GTAAAAGGAG AATACAAATT CAAATACGAA TTCAAAACCG ACAGCACAAA ATTCTTAGTT
GGCAGTGCAT TTTCTAATAC ACTAACATTA TTATTCCAAC CAAACGAGGA AATTTCTCTT
GGAATTACTT ACGATGGTGC AAATATATCA AATGCAAATG TCAAATTATA CAAAGATAAC
TACGGTTTTG AATTATTCTA CAAATCTCCT TTTGCTTATG TATCAGATGA TTCGCTTTAT
TCAATTGGAA AAAATACAGG TGCTCTTTTT AAATACTCTC TTGGCGATTA TTTACTTATA
ACAGGTGTGG GATACGAAAG TGGAAAACTC CCATGGATAG TAGGTATAGA TGGCAAGATG
TATAAATTAT ACGTGTCGCA AGACTATTTC TCAAGTGATG TAGCTATTGT TGGAGAAATT
TCACTACCAG AGACATTCGG ACTTTCAATT TGCGGAATGT ACAGTTTGGA TCAAACATTC
TTTGTAAGTA CCACATTTTC ACTTAACGCA TTTGGGATTT ATGCATCATT TGATGGAACA
AACATATACG GTAAGATAAG AACAACATTA GGAAAAGATA CAATTTCACT AGATGGAAGA
TACGATATAA GTTATTCAAG TATAAATGTA TCAGCAACCT ACGCAACGGA AGGAATAGAA
TATTACATTG GTACAGACCT TTCAAATGTA GATGCAAAAG TAACATTTAT TATGAAAGAT
AAAAAGTTAT CACTTGGACT AAAAACTGAT ATTAGTGATT TCATTAATAG AACTTATTTA
TCTCTCTCCG GAGAAGTTAA TTTCTAA
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| Protein sequence | MKGYKLLIVL VISVLLISVT SIFAGVKFVN GKVVFTFKAE ANVVYLAGNF NNWNPTAWPM
KLTDGVWTYE VELKPGSYQY KYVIDGKTWK EDPEAPAYVD DGFGGKNGAF TLTADGKILG
EQGTQQSQGK KYELNEKREN TIFVDPDGYV VIRINAPGAK HVFIAGSFNN WNDKDTECYY
VDAGWWEAVL ELSPGIYEYK FIIDGNWTVD PNAFGYTDDG FGGKNAVLEV AKEGGKLIVR
APQNATKSEG AKEEKTQEQV TTAETVKPGL SIDGNKVIFA VKKENAQEAY LAGSFNSWNP
KALKMQLVNG YWVASLVLQP GTYEYKYVFL IGGNYVWEED PNAPGYKSDG YGGKNGIFKL
VQKDGKISIE ELQQTAGGLP VKGEYKFKYE FKTDSTKFLV GSAFSNTLTL LFQPNEEISL
GITYDGANIS NANVKLYKDN YGFELFYKSP FAYVSDDSLY SIGKNTGALF KYSLGDYLLI
TGVGYESGKL PWIVGIDGKM YKLYVSQDYF SSDVAIVGEI SLPETFGLSI CGMYSLDQTF
FVSTTFSLNA FGIYASFDGT NIYGKIRTTL GKDTISLDGR YDISYSSINV SATYATEGIE
YYIGTDLSNV DAKVTFIMKD KKLSLGLKTD ISDFINRTYL SLSGEVNF
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