Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_1168 |
Symbol | |
ID | 5451516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 1253946 |
End bp | 1255766 |
Gene Length | 1821 bp |
Protein Length | 606 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640874939 |
Product | extracellular solute-binding protein |
Protein accession | YP_001410672 |
Protein GI | 154249847 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000870652 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGAAAC TTGTTGTATT TTTAGCAGTA CTTTTTGTAG TTTCGCTTTT TGCAGTGCAA GTAAACTACG GTATATTCTC TGATATTACA ACAACAAACA TTTGGAACTT ACTCGGTTCA GGTTCGTCTT CCTGGAACTT CGTTGTCCAA CTTTGGAAAT ATCCATCACT ACTTGGTATG AACAAAGAAG GTCAGCTCAT ACCATCCGCA GCTGCCGATA TTCCAAAAAT CGTTAAAGAA GGAAATATGT ACACCGTTAC AGTGAAACTC AGAAAAGATA TGCGCTGGTC AAACGGTGCA CCATTTACAG CAGACGATGT TGTTTTTACG TACACAACGG TTAAAGGCAT GGAAATACCA GGTGGTAACT GGGGCGGAGC TTACGAACCA GAAAAAGTTG AAAAAATCGA CACATGGACA GTAAAATTCT ACTTCAAGGA AAAGAAGACA ATGACAATTT ACTATGACAC ATTAATGACG GCAATTGTCT GTAGCAACTA TTGGAAACCT ATAGTAGATA AGGCAAAGAA ACAGAAAGAT CCAGTTAAAT GGTTACTCTC TCAAGAAGTT ATAGACCCAG GTATAACAGC ACTCAACCTT GGCAAAATTG AAAAAGGTGC GTTCGTACAA GTTGTAAAAC AAATTTCAAA TGATAAATAT TGGTCATACG GAGAAAAGAA CTTATACTAC AAAAACGGCG GTTTTTCAAT TGTTAACCCA AAGACAGGTT TCAAATGGTC AACAACAGAT CCAAAACCGG CTGGCGATGT AGCTCTCGAA GTTGTTAATG GACCATTTGT AGACACAATA GTTTACAAAG TTTACGGTAA CAAACAAGTT GCTATTCAAG CACTTATCGC CGGTGACATT GACTACATTT ACAACCCAGT TGGACTAACG GCAGGTGAAG CAGAGCAACT CAAGGGACAG AAAGATATAA AGATAGTTTC CAACCCACAA CTTGGTTTCA GATACCTTGC ATTCAACATG AGAAAATTCC CAATGAACGT GAAAGAATTC AGACAAGCAT TGGCAGCATT AATCGACCGC GATTTCATAT GTAACCAAGT GCTCCAAGGT AGAGCTATTC CACTTGCAAC ACCAGTGCCA CCAGCCAACA CATTCTGGTA CAATTCCGCA GTTAAAACTA TCGGTGAAGG ACTCAGTATG GGTGAAAGAT ATCAACTTGC AATCAATTTA CTTAAGAAAG CCGGCTTCAA ATGGGACGTT GAACCCGTTA TCGATCCAAA AGATACAAAA AACCCAGTTA AAACACAAGG TAAGGGCTTA AAAGGTCCAG ATGGCAAACC AGTACCAACA CTTACCCTCT TATCACCAGG TATGGATTAC GACCCAATGA GGGCACAAAC AGCTATGTAT ATTGAACAAT GGGCAAAGAA CATCGGTATG CCAATTAACC TTAAACTTAC AGATTTCAAC GAAATTTCAA CAAAAGCATT CGATGATGTT GACTTCGATA TGTACATACT CGGTTGGGGT GTCGGAAGAG TTCCAACATA CTTCAAATCA TTCTGGCACA GTGGAGAAAT GGCACCAGAT GGATTTAACA CACCAGGTTA CAAAAACCCA GAATTTGATG CTCTTGTAGA AGAATTTGAA TATGCCGATG ACTTCAATCA AGCAAGAAAG GCAATATTTG AAGCACAAAA GATACTCGCA GACGATCTCC CATACATAAT CCTCTTCACA AATCCAATGA TAGAAGCATA TAGGACCTCC ATTAAATTCC CATTCGACAA TATGCTTGAT GGTATCCAAG GTTACTACGG ATTCCCAGAA GGAGTAAAGA AAGCACAATA A
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Protein sequence | MKKLVVFLAV LFVVSLFAVQ VNYGIFSDIT TTNIWNLLGS GSSSWNFVVQ LWKYPSLLGM NKEGQLIPSA AADIPKIVKE GNMYTVTVKL RKDMRWSNGA PFTADDVVFT YTTVKGMEIP GGNWGGAYEP EKVEKIDTWT VKFYFKEKKT MTIYYDTLMT AIVCSNYWKP IVDKAKKQKD PVKWLLSQEV IDPGITALNL GKIEKGAFVQ VVKQISNDKY WSYGEKNLYY KNGGFSIVNP KTGFKWSTTD PKPAGDVALE VVNGPFVDTI VYKVYGNKQV AIQALIAGDI DYIYNPVGLT AGEAEQLKGQ KDIKIVSNPQ LGFRYLAFNM RKFPMNVKEF RQALAALIDR DFICNQVLQG RAIPLATPVP PANTFWYNSA VKTIGEGLSM GERYQLAINL LKKAGFKWDV EPVIDPKDTK NPVKTQGKGL KGPDGKPVPT LTLLSPGMDY DPMRAQTAMY IEQWAKNIGM PINLKLTDFN EISTKAFDDV DFDMYILGWG VGRVPTYFKS FWHSGEMAPD GFNTPGYKNP EFDALVEEFE YADDFNQARK AIFEAQKILA DDLPYIILFT NPMIEAYRTS IKFPFDNMLD GIQGYYGFPE GVKKAQ
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