| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1126 |
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| Symbol | rplE |
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| ID | 5452940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 1217707 |
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| End bp | 1218261 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640874894 |
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| Product | 50S ribosomal protein L5 |
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| Protein accession | YP_001410630 |
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| Protein GI | 154249805 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0094] Ribosomal protein L5 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0974998 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCCTACG AATTTGTTCC TTTGAAGGAA AAGTATCAAA AAGAAGTGGT GCCGGTTTTA
ATGAAAGAAT TTGGATATAA AAATATTCAT GAAGTTCCAA GACTTGTTAA AGTAGTTATA
AATATGGGTG TTGGTGAAGG TTCAAGAAAT AAAGATGTTA TAGAAGCGCA CGCAAGAGAA
TTAACAACAA TAGCTGGTCA AAAGGCAATA ATCACAAAAG CAAAAAAGAG TATCTCTAAC
TTTAAGATAA GAAAAGGTAT GAGCGTTGGT GTAAAAGTAA CGCTCAGAGG GCCAAGAATG
TACAATTTTG TCTACAAACT TGTTAATCTT GTTTTACCTA AAGTTAGAGA CTTCAGAGGT
TTAAATCCAA ATTCATTTGA TGGAAAAGGT AATTACAGTT TCGGTTTAAC AGAACAATTG
GTATTCCCAG AAATTTCACC AGACCAGATC AAGAGGATCC AAGGTATGGA TATTGTAGTG
GTTACAACAG CAAAAAGAGA CGAAGAAGCA AGAAGATTAC TTGAGTTACT TGGTTTCCCA
TTCAAAAAGC AGTAA
|
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| Protein sequence | MAYEFVPLKE KYQKEVVPVL MKEFGYKNIH EVPRLVKVVI NMGVGEGSRN KDVIEAHARE
LTTIAGQKAI ITKAKKSISN FKIRKGMSVG VKVTLRGPRM YNFVYKLVNL VLPKVRDFRG
LNPNSFDGKG NYSFGLTEQL VFPEISPDQI KRIQGMDIVV VTTAKRDEEA RRLLELLGFP
FKKQ
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