| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1089 |
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| Symbol | |
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| ID | 5451934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 1188656 |
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| End bp | 1189372 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640874857 |
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| Product | lytic transglycosylase catalytic |
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| Protein accession | YP_001410594 |
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| Protein GI | 154249769 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTTAATA ATGCCAAAAA GCTTAGCAAA TTAATCTTAG TTCTGTCTTT TATTTTAATA
CTAAGCTCTA TAGCGCTTTG TGAAACACCT AAATGGTTTT TGGAAGTGGT TACTAAAAGA
AGAGCAAACG TGAAGGAAAA AACAACAGAA GAATTCATTA ACGATTTATG GAATACTATT
TCAGATATAA GTGAAAAATA CAACATTGAT CCTGTATTTA TAAGCACTGT AATAGCCATA
GAAAGTAACT TTACAAATGC TAAAGGTCCC GGTGGGGTAC TTGGGATGAT GCAGATTTTG
CCGTCAACTG CACAAGGTAT AGCTAGATTA CTTAAACTGG AAGTTCCAAA AGATGGTTGG
AATGCTTTGC TCACTGATTA TAAATTGAAT ATAACTTACG GAACAGCATA TTTGTCTTAC
CTTTATAAAA AAACAGGCTC GCTCTCAAAA GCCCTTGAAG AATATAACAA TGGTAAAAAT
AAGCAAAAAT ATGCTGCCAC AATAATGCAA CAGTACGAAT ATTATAAAAG TTTACACGAA
AAAGAGCTTA AAGAAAAAGC TCAAATAAAC ATAAATACAT TCATCGAAAC TTCGGAAAGT
TCATCAACAC AACAAGCAAC TCAAGAAACA CAAGAAACAA CTCAAGAAAC TCAAACAACA
AATTCAACTA TAACTGAAAA CTCAACCGAT ACATCAGCAA CAAAAAGTGA AAATTGA
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| Protein sequence | MLNNAKKLSK LILVLSFILI LSSIALCETP KWFLEVVTKR RANVKEKTTE EFINDLWNTI
SDISEKYNID PVFISTVIAI ESNFTNAKGP GGVLGMMQIL PSTAQGIARL LKLEVPKDGW
NALLTDYKLN ITYGTAYLSY LYKKTGSLSK ALEEYNNGKN KQKYAATIMQ QYEYYKSLHE
KELKEKAQIN INTFIETSES SSTQQATQET QETTQETQTT NSTITENSTD TSATKSEN
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