| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1054 |
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| Symbol | |
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| ID | 5452734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 1148234 |
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| End bp | 1150252 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640874823 |
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| Product | glycyl-tRNA synthetase, beta subunit |
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| Protein accession | YP_001410560 |
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| Protein GI | 154249735 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000126783 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAC CAAATGAATT TCTCTTTGAA CTTGGCATAG AAGAACTTCC AACCACGGAA
ATAAATGGAT TAATTCAGCA ACTCTCCGAT AAAATTCAAA ATACACTGAG CGTTGAAGGT
ATAAATTACG AAAAATTCCA AATCTTTGTA GCACCACGTA GGTTTGGATT TGTAATCGAA
GGTTTACCAG ATAACACCCC AGAGAAAGTT ATCGAAAAAA AGGGACCAGC TGCGAATATC
GCATTTGACG AAAACAACCA ACCAACAAAA GCACTGCTTG GTTTCTTAAA GTCGAACAAT
TCAACACTTG AAGAAGTCAA AATAATAGAT AACTATGTGT ACATTACTAA AACGCAAAAA
GGTCTTCCAA TAGAAGAATT TTTGAAAACC ACAGTCCCAT CTATAATAAC TTCAATCAAA
TTCAGAAAAC CGATGAAGTG GGCAGATGGG AAATACGAAT TTGTAAGAAT ACCACACCAT
GTACTCGCAC TATTAAATGG AAAAATAGTT GAAATGGAAA TTTTCGAGAT AAAATCATCT
AATAAAACAG TTGGGCATAG ATTTGTTATG GATGAATACT TCGAAGTCAA TTCGGTACAA
GACTACTTTG ACAAATTGAG CAAATACTAT GTGATACCAA AACTCGAAGA CAGAATAAAA
TTCATAAAGT CACAACTCGA GGAATTTGAA AAGAATGGTT ACACAATTGA TAAAGATGAA
GAATTAATCC AAGAAGTCGC GATACTCACA GAATATCCAA AATTAATTTC AGGAACATTC
TTAGAAAAAT ACCTGACATT GCCAGAGGAA CTGATAAAAA CAACAATAAA GCACCACCAA
AGGTCATTTA CAGTACACAG TGGCAATAAA ATAACAAACA CATTTGTTGC TTTTATCGAT
ATGCCAATGG ATGAACTTGG AAACGCTAAA AAAGGTTACG AAAGAGTTAT CAACGCAAGG
CTCGAAGATG CAAAATACTA TTATGAAAAA GATATTCATT TTAAGCTTGA ATCATTTAAC
GAGAAATTGA AAGAAATTGT ATTCCAGAAA GAACTTGGAA CGCTATACGA CAAAATATCA
AGAATTGAAC AACTTTCGAA AAAAATAATA GAAATTTTGG AATTAGAGAA AATAAGTGAT
AATATATTAA GGACAGCAAA GCTTTGTAAA GCGGATATTG GAACGCATGT TGTCTATGAA
TTCCCAGAAC TTCAAGGAAT TATGGGAAGA ATTTATGCGT TAAAAGATGG AGAAGCAGAA
AACATTGCAT ATGGAATTGA AGAGCATTAT AGCTCAAATC CATCGACCGT TGAGGGAGCA
GTAGTAGGAA TTGCCGATAG AATAGATACC ATAGTAGGTA ATTTCATCAT TGGGAACATA
CCAAGCGGTT CGAAAGACCC TTACGGATTG AGAAGCAAGA CAGACGACAT TTTTGCAATC
ATTGAAAAGT TTTCTTGGGA TTTGGATTTA AAGGTATTAC TTGAAAAAGC AGCAGAGCTA
TTAGGTAAAG AATTACCAAC AACATTAATA GAATTTTTTG AAAATAGATT TGAATTGTAC
AACTCAAATG TAAGATATGA CATAGCCAGA GCAGTAAAAC ACCTTTGGAA AAAACCACTA
AGAGGTATAC TATCAGCAAA GGCTATTTAC AAACTCGTTG GAAAAGAAGA ATTTGAACAT
CTTTTAGTTG GTTTTGAAAG GGTACACAAC ATATCCAAAA AACACATATC GGAACATTTT
GACTCTGCAA AATTTGTAGA AGAGTCAGAG AAAAAATTAT TCCAAAAATA CATAGAAGTT
AAACCCTTTG TTTTAGATGC GATAAAACAT TTAGATTTTG AAAGCGCGCT TGAGAAATTA
ATCGAACTCA GACCGTATAT CGATGAATAC TTTGACAAAG TATTTGTAAT GTGCGAAGAT
GAAGATCTAA GAATGAATAG ACTAGGGTTT TTAAAAAATA TCGATATGCT ATTTATGGAA
ATTGGGGATT TAACACTTAT AGAGCATTCA CAAAACTAA
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| Protein sequence | MSKPNEFLFE LGIEELPTTE INGLIQQLSD KIQNTLSVEG INYEKFQIFV APRRFGFVIE
GLPDNTPEKV IEKKGPAANI AFDENNQPTK ALLGFLKSNN STLEEVKIID NYVYITKTQK
GLPIEEFLKT TVPSIITSIK FRKPMKWADG KYEFVRIPHH VLALLNGKIV EMEIFEIKSS
NKTVGHRFVM DEYFEVNSVQ DYFDKLSKYY VIPKLEDRIK FIKSQLEEFE KNGYTIDKDE
ELIQEVAILT EYPKLISGTF LEKYLTLPEE LIKTTIKHHQ RSFTVHSGNK ITNTFVAFID
MPMDELGNAK KGYERVINAR LEDAKYYYEK DIHFKLESFN EKLKEIVFQK ELGTLYDKIS
RIEQLSKKII EILELEKISD NILRTAKLCK ADIGTHVVYE FPELQGIMGR IYALKDGEAE
NIAYGIEEHY SSNPSTVEGA VVGIADRIDT IVGNFIIGNI PSGSKDPYGL RSKTDDIFAI
IEKFSWDLDL KVLLEKAAEL LGKELPTTLI EFFENRFELY NSNVRYDIAR AVKHLWKKPL
RGILSAKAIY KLVGKEEFEH LLVGFERVHN ISKKHISEHF DSAKFVEESE KKLFQKYIEV
KPFVLDAIKH LDFESALEKL IELRPYIDEY FDKVFVMCED EDLRMNRLGF LKNIDMLFME
IGDLTLIEHS QN
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