| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0915 |
|---|
| Symbol | |
|---|
| ID | 5451921 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | - |
|---|
| Start bp | 990876 |
|---|
| End bp | 992630 |
|---|
| Gene Length | 1755 bp |
|---|
| Protein Length | 584 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640874675 |
|---|
| Product | CheA signal transduction histidine kinase |
|---|
| Protein accession | YP_001410422 |
|---|
| Protein GI | 154249597 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACTTCT TAGAAATGTT TTTTGAGGAA CTTCGTGAGA AGGGAAATGA ATCAATAAAT
GACATAAAAT CCTTCCTTGA ATCGAGAGAT GGAGCGTTGA TAAATGATAT ATACAGATTA
TTTCACACTA TCAAAGGGTC AGCAAGTCTT GTTGGACTTG TTGGTTACAA AAATTTATTT
CATAAAATCG AAGATTACTT CAAAAGTTAT TTGGCTGGAC AAGGTGAATT ATCAGATGAA
TTTTTGTCAA GGCTATTATC GATAATACCA CCTCTTTTGG AGCGTGATGG CGACCTTTCA
GAATCAGAAG TCCAGGATTT AATCGATAGG TTAGAAGGAA AGAAAGAGGC TGAAACAACT
ATATTTTCTA AAGAGCAGGG AGCTTTATCT GTCGAATATA TCCAAGAATT TTTATCGATG
GCTCTAACAA CGGAAAATAG CTTAATGCGT GGAGATATAA ATAGTGCACT TAGGATTATT
CGTTTGGCGA AGTCCAAATT AACTTCCACT ATCCAAGAAT TATACTATAC TAAGCTTCGA
AATATTCTTT CGAACTTCGA TACATTAATC GTTCAGGAGG CAACGAATGC AAAAAAGAAA
GTAAGATTAA ACCTTGAGAT TGGTGATGAA ATGGTTGAGA AGAAAGATTC GAAAGCTTTA
ATTGATATAC TTGTTCACTT AGTTAGAAAT TCGATATCTC ATGGTATAGA ATCGCCTGAT
GAAAGGAAAA AAATTGGAAA AGACGAAATA GGCGTAATAA CTATTAGAAG TTATGTGCTG
AATAATGAAC TCTATTTAGA GGTAGAAGAC GATGGTCAAG GGATAGACTT TGAAAAAGTA
AGAAAGAAAG CCATGGAGAG AAACCTTGGA CACTTAAGAC CAGAGGATGT TATATTTGTG
CCCGGATTTT CAACAAAAGA AGAAGCTGAT GGTACAGCTG GTAGAGGTGT TGGACTTGAC
GCTGTCAAGA ATTTTGCTAT GGCACGTGGT GGTGATGTGG AGTTTGTTAC TACACCGGGA
ATAGGAACAC GGTTTATAAT CCACTTTCCA GTGAAATCAT TCCTTATTAA AGTACTCGTT
CTTGAAGCTG ATGGGCAACA ATTTTGTATA AGTACACAAG ACGTGCTTGA GATAGTTACG
AAGTTAAAAG CAATTGATGG TAAAGTTAAA TACAAAGATA AGGTATGCGA TGTAGTGTAC
AAATCCTCGA ATCCAAGATT TGGAATAATA ACCCGAAATT ATAGAGCTAT TTTCGTAGAT
AATATAGTTG GCATTTTCGA TGGGCAAGTA AGTAGTGAAA GCTATCCATC TGTAAAGGGT
TTTGTCAAAA ATGTTTATGT TTATCCATTA CCTATAATCG ATATAGATTC ATTTAGAGAA
GGAGAAGTTA AAAAAACAAA GAAAATCAAT GTTTTACTCG TTGACGATTC TGTCGTTACA
AGAAGTGTTG TATCTAAGTT CTTGGAAGCT TTTGGTTACG AGGTAATAGA AGCCAAAAAT
GGTTCAGAAG CGATAAGTTA TGTTGAGAGT TCAAATTGCG ATGTTGTTGT TTGCGATGTG
GAAATGCCAG ATATAGATGG TTTTGAAACC ACAAGGAGAA TAAAACAAAT AAAAAAAGAC
TTACCGGTGA TATTGTTTAG CACACTTTCT AAAGAACAAT TAGCAAAAGG ACTCGAAGTT
GGTGCGGATG CTTATTTATC AAAAGAAGAA TCACCAGAGA GATTGCTGAG ATTAATCGAA
AAATTGGTAG GATAA
|
|---|
| Protein sequence | MDFLEMFFEE LREKGNESIN DIKSFLESRD GALINDIYRL FHTIKGSASL VGLVGYKNLF
HKIEDYFKSY LAGQGELSDE FLSRLLSIIP PLLERDGDLS ESEVQDLIDR LEGKKEAETT
IFSKEQGALS VEYIQEFLSM ALTTENSLMR GDINSALRII RLAKSKLTST IQELYYTKLR
NILSNFDTLI VQEATNAKKK VRLNLEIGDE MVEKKDSKAL IDILVHLVRN SISHGIESPD
ERKKIGKDEI GVITIRSYVL NNELYLEVED DGQGIDFEKV RKKAMERNLG HLRPEDVIFV
PGFSTKEEAD GTAGRGVGLD AVKNFAMARG GDVEFVTTPG IGTRFIIHFP VKSFLIKVLV
LEADGQQFCI STQDVLEIVT KLKAIDGKVK YKDKVCDVVY KSSNPRFGII TRNYRAIFVD
NIVGIFDGQV SSESYPSVKG FVKNVYVYPL PIIDIDSFRE GEVKKTKKIN VLLVDDSVVT
RSVVSKFLEA FGYEVIEAKN GSEAISYVES SNCDVVVCDV EMPDIDGFET TRRIKQIKKD
LPVILFSTLS KEQLAKGLEV GADAYLSKEE SPERLLRLIE KLVG
|
|---|
| |