| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0895 |
|---|
| Symbol | |
|---|
| ID | 5452886 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | - |
|---|
| Start bp | 971063 |
|---|
| End bp | 971839 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640874655 |
|---|
| Product | HemK family modification methylase |
|---|
| Protein accession | YP_001410404 |
|---|
| Protein GI | 154249579 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2890] Methylase of polypeptide chain release factors |
|---|
| TIGRFAM ID | [TIGR00536] HemK family putative methylases
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00424484 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCT CTGAAGTTTT GAAGCTTTAC AAAGAGAAAG GGCTTCCCGA GAGGGAAGCT
CTGATTTTGA TTAGTAAGGT GCTTGAAAGG TCAAAAGAAT TTGTCATTTC ACATGATGAG
TTGGAATGCC CTGAACAGGC AATAGAGCTT TTGGAGAAAC GTCTGACAGG TTACCCACTC
CAATACATAT TAGGTGAAGT TGAATTTTTC GGGAGGAAGT TTTACATAGA AGAAGGGGTC
CTTATACCTC GTTGGGAAAC GGAAGGGCTT GTTGAAATAG CTATTGATTT GATTAGAAAA
AATGGTATAA AGAAAGTATT GGAAATAGGA GTTGGAAGTG GGGTGATATT AATTACCCTT
GCTTTGGAAA CAGGCGTGGA GTGTTACGGA ACAGATATTA ATCCAAAGGC AATTGAAGTT
ACAAGAAAAA ATTCTCAAAT GTACGATGTT AGTTGTGAGT TGAAACTTGG CGAATACGCC
GAGCCGTTTA TTGAGAAGTT CGATGAATTT GAATTGATTG TTTCAAATCC GCCTTATGTG
AGAGCGGATG CTGTTTTGCC TATAGAAGTT CAATATGAGC CACCTGATGC GTTATTCGCG
GGAAAAGATG GTCTTGATTT TTACAAAAAG TTCTTTGAAC GTTACAATAT TCAAGGTAAA
ATAGTTGTAA TGGAGATAGG AGAAGATCAA GGAGAGGCGT TGAGAAAACT TACAGGTGGA
GAAATACTGA AGGATTTAGC CGGTAAAGAT AGGTATTTGG TAGTTATAGG CAATTAA
|
|---|
| Protein sequence | MKISEVLKLY KEKGLPEREA LILISKVLER SKEFVISHDE LECPEQAIEL LEKRLTGYPL
QYILGEVEFF GRKFYIEEGV LIPRWETEGL VEIAIDLIRK NGIKKVLEIG VGSGVILITL
ALETGVECYG TDINPKAIEV TRKNSQMYDV SCELKLGEYA EPFIEKFDEF ELIVSNPPYV
RADAVLPIEV QYEPPDALFA GKDGLDFYKK FFERYNIQGK IVVMEIGEDQ GEALRKLTGG
EILKDLAGKD RYLVVIGN
|
|---|
| |