Gene Fnod_0888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0888 
Symbol 
ID5452021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand- 
Start bp963282 
End bp963779 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content34% 
IMG OID640874648 
Productrubrerythrin 
Protein accessionYP_001410397 
Protein GI154249572 
COG category[S] Function unknown 
COG ID[COG1633] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.581272 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAAGA TTTTAGGGAT TTTAAGATTT GCATTGGCGA GAGAAATAGA AGGTAGAGAA 
TTTTACAAAG AGAAAGCTAC ACGTGCTAAA AGTAAAGAAG TAAGGGATAC GCTTGAAAGT 
TTATGGAAGA TGGAAGAAGA GCATGTAGAA TTTATAAAAA GTCTTATGGA AAAGGTACAA 
AGTGATATAG AAATAGATGT TGATTCTGTG CTTACAAGAA GTGACTTTTT CGAGGAAAGA 
GAAAAAGAAG AGCTTTCAGT AGGGACGCTT GATGATATTG CAAATGATAT GAGTATACTT 
AGAATGGCTT ATCTTATCGA AGAAGATTTT GAAAATTTTT ACAGAACCAC TGCTGAAAAA 
GTTGAGGATA GCGATATGAA GAGGATTTTA AATACTCTTG CAAAATGGGA ATTGGGACAC 
AAGAATATGC TCTTTGAACT TTACAACGAT GTGAAAAATG CGTACTGGAA TAAACAGGGA 
TTTACTCCAC TCTTTTAG
 
Protein sequence
MEKILGILRF ALAREIEGRE FYKEKATRAK SKEVRDTLES LWKMEEEHVE FIKSLMEKVQ 
SDIEIDVDSV LTRSDFFEER EKEELSVGTL DDIANDMSIL RMAYLIEEDF ENFYRTTAEK 
VEDSDMKRIL NTLAKWELGH KNMLFELYND VKNAYWNKQG FTPLF