| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0886 |
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| Symbol | |
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| ID | 5452870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 961429 |
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| End bp | 962208 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640874646 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001410395 |
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| Protein GI | 154249570 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.36483 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAATAG TTATCTTAAC TAAAGTTTTT TTCTCAGCTT TAGCATTAGT AATTGCCTAC
GTAATTCACA AAGTAATAAT GAAATCCATT GATAGATTCA TGTCAACTTT CGGGAGAGAA
ATTAAGGCTC CAAAGACTTT ATCGCTTTTA ATAGCATTTT TAGTTTACGG ATTTGCTGTA
GCTGGTGTAC TTTCGATATG GGATGTTAAT CTTACGCCAT ATCTTACAGG TTTGGGAATA
TCTGGTGTTG TTCTTGGACT CGCATTTCAG GAGCCTTTAA CTAACTTTCT TTCTGGGATA
CTTGTTCTTG TTACTCGTAA AGTGTTTGAA GGAGAGGTTG TGGATATAGA TGGGCAAAGT
GGTACTGTGG ATATCATAAA GATGAACCAT ACTCATTTGG TTACATTTGA TGGTAAACTT
GTACTTATAC CTAACAGAAA GGTCTGGTCT GGAACCGTTA CGAAGTTCTG GCCCGGAAAA
TACAGAAGAA ATGAGATTGA TGTTACAGTG GATTACTCAA CAGATATGAA GCTTGTGGAG
AGCGTTTTAA AGAAAGTTTT GGAAGATGAA CCTCTTGTTA TAAAAGACGA AAGTGTAACG
AATATGGTTG TTTTCAAATC GTTCAATGCG AGCGGAGTTA CTTATACGGT AAAATTTTGG
GCAGAACGTG AAACATTTAT AGACTCATTA AATGCCGTTG CCTTAAGGAT AAAGAAGTAT
TTTGATGAGT ATGGAATATC TATACCATTT ACAATTGTCG AGGTTAGAAA TAAAAATTGA
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| Protein sequence | MTIVILTKVF FSALALVIAY VIHKVIMKSI DRFMSTFGRE IKAPKTLSLL IAFLVYGFAV
AGVLSIWDVN LTPYLTGLGI SGVVLGLAFQ EPLTNFLSGI LVLVTRKVFE GEVVDIDGQS
GTVDIIKMNH THLVTFDGKL VLIPNRKVWS GTVTKFWPGK YRRNEIDVTV DYSTDMKLVE
SVLKKVLEDE PLVIKDESVT NMVVFKSFNA SGVTYTVKFW AERETFIDSL NAVALRIKKY
FDEYGISIPF TIVEVRNKN
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