| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0834 |
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| Symbol | |
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| ID | 5452310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 912058 |
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| End bp | 913665 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640874586 |
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| Product | flagellar M-ring protein FliF |
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| Protein accession | YP_001410344 |
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| Protein GI | 154249519 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000164203 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATTGGT TTAGGAAATT TGTAGATTGG TTTGCAAAGT TTCCTGAAAA ATGGAAAGCT
TTGCAAAAAG GACAAAAATT AGTGATTATA ATGATAATAG CATCTGTGAT TTTGGCTATA
ATTCTTCTTG CCATTGTAAA TGCACCAAAG TATGTTTTGC TTTTGACAAC GCGAACTGAA
CAAGATGCTG GAAGTGTTAT ACAACAACTT GAAACATTGG GAATACCCTA CAAAGTTGAA
GCTGGTAACA GGATATTGAT CCCATCGAGT TATAACGTTT ACGAAGTTAG AATGAGATTG
GCTTCTACTG GAATTCTTTC TGGTTCTTCA AGAGGATTTG AAATTCTTGA TCAGACTTCA
CTTGGTGCAA CAAGTTTTGA TAAGCAGGTC AGATATCAAA TAGCACTTCA AGGTGAATTA
GAAAGAACTA TTTCAACGAT AAAAGGTGTA CAAAGTTCAA GGGTTGTACT TACACTTCCG
AAATATACTT ACTATGTACG TGGTGAAATG TCGGAGCCGA GAGCTTCGGT TATGGTTGTT
ATGGATCCCG GTCAAAGTCT AAGTAAAGAA CAAGTAAAGG GTATTGTTTC ATTGATCCAG
GGAGCTGTTG AAGGGATAAA GACTGAAAAC ATAAAGATTA TCGATCAAAC GGGACAAGAC
CTAACCGCTA TGTTGAATTT GGATCAATCA ACTGCGCTTG CCTCCACAAA AATGGAACTT
AAAGTTAACC TTGAAAATTA TTATAAGCAA AAGATAAAAG TTCCACTTGA AAATATTTTT
GGGCCAGGTA GAGTGGAAGT TATACCAGAC GTTAAATTAA ATTGGGAAAA AGTTGAAAAA
CAGATAACCA CATACACTGC TCCAAATAAA AAAGAGGGAT TGGTAAGGAG TAAAGAAACG
GAATCTGAGT ATTCTACAAC AAGTCAAGGA GCTGGCGGCC CCGTTGGTAC AGAGTCTAAT
ATTCCACCAA CAACTTACGA ATCAACTGAA GGAACAGGAG TAACTACCTA TCAAAAAAGC
CATGAGATAG TTAATTACGA ACTTAATCAA GTTATTGAGA ACATTGTTAA AAATACTGAA
GGAGAAATAG AAAATATAAC GGTATCTGTT GTTATAGATT CATCTTCCAC TGTTCTTGAA
AGGACCTCAA AGGATGAAGT GCAAAATTAC ATTAAAACCA TCATCGAAAA GAGTATATCA
GCTAATACTC CAAACGGTAG CGTAACTTAT GCTGTTGCAT TTTTGCCATT TAGTAGAGAA
ATTCAGGAGC AGTTTTATAA AGAATTGCAA ACTACTACTG AAATACAAAA ACTTAGAACA
AGGTTGATAT TGGTATTACT TGCTTCTATA CTTATATTCT TCGCTTCTTA CCTTGGTCTT
ATTCAATTTA GAAAAATAAA AGCAAGGAAG ATGATTCAAG AAAGGTACAA ATTGTTACAA
GAAGAAGCAC AACGAGCATT GGAAGCCATT GAACAAGCAG AAGAGGTACA ACCAGGCGGA
GAGGAAGAGG CTATACTTGA GCAACTCAAA GAATACTTAC AACAGGTTTC CGAAGCTTCT
CCAGAAGAAG TTGCTACCGT GCTAAAGGTA TGGATAAGCG AGAAATGA
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| Protein sequence | MDWFRKFVDW FAKFPEKWKA LQKGQKLVII MIIASVILAI ILLAIVNAPK YVLLLTTRTE
QDAGSVIQQL ETLGIPYKVE AGNRILIPSS YNVYEVRMRL ASTGILSGSS RGFEILDQTS
LGATSFDKQV RYQIALQGEL ERTISTIKGV QSSRVVLTLP KYTYYVRGEM SEPRASVMVV
MDPGQSLSKE QVKGIVSLIQ GAVEGIKTEN IKIIDQTGQD LTAMLNLDQS TALASTKMEL
KVNLENYYKQ KIKVPLENIF GPGRVEVIPD VKLNWEKVEK QITTYTAPNK KEGLVRSKET
ESEYSTTSQG AGGPVGTESN IPPTTYESTE GTGVTTYQKS HEIVNYELNQ VIENIVKNTE
GEIENITVSV VIDSSSTVLE RTSKDEVQNY IKTIIEKSIS ANTPNGSVTY AVAFLPFSRE
IQEQFYKELQ TTTEIQKLRT RLILVLLASI LIFFASYLGL IQFRKIKARK MIQERYKLLQ
EEAQRALEAI EQAEEVQPGG EEEAILEQLK EYLQQVSEAS PEEVATVLKV WISEK
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