| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0829 |
|---|
| Symbol | |
|---|
| ID | 5453071 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | - |
|---|
| Start bp | 906084 |
|---|
| End bp | 908537 |
|---|
| Gene Length | 2454 bp |
|---|
| Protein Length | 817 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 640874581 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001410339 |
|---|
| Protein GI | 154249514 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4717] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.962006 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCTAA AAAAAGCTAA GATAAATGGA TTTGGCAAGC TAATAGATAG GCAATTTAAT
TTTACGCCAG GAATGAATAT AGTATTTGGT CCAAATGAGA GTGGCAAGAC TACGCTTGCC
AGATTTATAC TTTACACACT TTCTAATCCA AGCAACGAGG CACTTAAATA TAAACCTTGG
AACGGTGAAG AATTTGGTGG ATTTTTGGAA ACTTCAGATG GAACATTTAT CTTTGGCGAA
AGTTCGGAGG AAAAGCAAGA TAAAAATTTT CTGGAGAGTA TAGCTTTCCT TATGGAAGAC
GATGAACTTG AGAGTTTGAA AATAGATAAA AGTATAATCG AAAGTTCTCT TAAGAAAAAG
AGCGAGAAAA CCGAGATGGG AAGAATTATA AAAGGGGTCA TGAAAGGCCT TGAAGAATTT
CAAATAGATA AGTGTGTAAA TAAAATTTCC TCTGATTTGA ATGGCGTAAA AGAGGAAATT
GAAAAATTAA AATCAATTAT AGTTGTTAGA AATAAACTAT ATTTAAAGAA GAATGATATT
TCAAAACGTT TAGAAAAAGC ACGTGACGAA CTGGAAAACT TGCAAGTTGA GTTAGAAAAT
CTAAGAAAAA AGAAAAAAGA AGAATTGAAA AACGAAATAA CCAAAGTTCA GATGAAAATC
GATGAAATAA AATCGAAACT TTCAAAATTG TCTTGGGTGG AACGTATAGA TCAGAATGTT
GTGTTCGAAA TCTATGGATT AATTAAAAAA ATAGATAATG TGAAAGAAGA AATTGATAAA
TTGGAAGAAG AGGAAAAATC TCTTGTAGAG ATTATTAATA CCAAAGACAA TGAGATAAAT
TCAAAGCTTA AATTGTTAGG AGCAACGTCT GAAAAGGATT TAGAAAGCAT AAGTTTGAGG
TTAAAACATC TTTCTCTACT TTCAAAGATG TATGGTGAGG GAATTAGTCA AACTGAAGAA
GAAGAACCTC TTTGGCATAT CTTTATTCAG GATCCATCTA TAATTGAACG TGCTGAAGAT
GAAGAACAAA AATATCAAGA AATAAAAAAT GCTATCGAGA AAGAAAAAAT AGACATTCAA
AATCAAATAG AAAAACTTGA GGGAAGCGCG AAATATTCAA AGGATTTATC TATACTATCA
GGTATAGCAG GCGTAGTGTT GTTAGCGCTT GGTTTATTGT TTAATAAAAT AGCTTTATTT
ATGTATTTGC CATCGGTTTT GTTTTTGGGC TTTGCTGTTT TGCTTTTACT AAAATCTAGG
AATAATATTT CAAAGCTATC GGTTCTTCAG GAAAAACTTG TGGAACTAAT GATGCATCAA
ACTGAGCAGC CTCAAGTTTG GAAATTGCTC AGTCAATACG GTGTTAAGAA TATTAGGGAT
TTGCGGAAGA AATATTCAGA ATTTCTCGAA TGGAAAGCAG CGAATGTTGA AAAGCAAAAG
AAAATTATAG AATTGAAAGA GATAGAACAG GAGATTATAA AAGAGCTTTC CAAGTTTAAT
GTAAATGGTT ACGCTCAAAT GGTTGTTTCC GCAGTCGAGA ATTTACAAAG GACATTTAAT
GAAGTTCAAG AACTTATTTA TGAAAAAGAA ACTCTCGAAA GGAAGCTTAC ACAGGTTCGT
GGCGAATATG TTTCTAAACA AAAAGAACTT AATCTGTTGC ATAATCATCT TGAAGAATCA
CTAAAGACAA ATGGTGTTTC TAAACAAGAT ATAGAAAATT ATCGTACCGA TTTTGAAAAT
TATCTAAAAC TTAAGTCAGA ACTTTCGGAT AATATTACCA CGCTAAAAGA TTTGGAGAAT
AGTCTTGAAA ATGAAGATTT GGATAGAGAA ATTCATTCAT GCAAGTTGTC TGTCGAAAAT
CAAATTAAGA TTATCAATGA ACTTGAGCAA ATGTATCAAG ATATTTGTAA AAAAATTGAA
GAAAATAGTG TCAACAAAGA ACTTCTCTCT GAACTTCTAG TAAAGAAAGA TGAATTAGAG
TTTAAGTTAT CACTGATAAA TTTGATAGGA AGTTATATCC CAAGACTTTT TGAACACCTT
AAAGATAGTT ATTCAAAATT TGTTGAAAGC TATTACAAAA ATTTCAGTGA TGAATTTATT
AAATTTTTCA ATTATGTTTC TGGACAAACT AAGAATTTCT TTGTAACCCC GGAACTTTCT
GTGAAGATAT TGGTTGAAGG GGATTTAAAA GATCCTTCTG AATACCTGAG TGGGTCCACT
AAAGACCTTC TAATTTTTGG TATTAAGAAC GCACTCTACA AATCATTTTA TGATGGAAAC
ATTCCTCTTG TTATAGATAA CACGTTAATT CGTTTTGATG ACGAGAGACT CAAAAGAATT
TGTGAATATC TTAAGGAGGA GTCAAATTAT AGACAGATAA TACTTTTAAC GAGTGATAAA
AGAATAATTA AGCATTTTCA TAAAAACACA AATGTATTAT ACTTGGAGGG GTAA
|
|---|
| Protein sequence | MFLKKAKING FGKLIDRQFN FTPGMNIVFG PNESGKTTLA RFILYTLSNP SNEALKYKPW
NGEEFGGFLE TSDGTFIFGE SSEEKQDKNF LESIAFLMED DELESLKIDK SIIESSLKKK
SEKTEMGRII KGVMKGLEEF QIDKCVNKIS SDLNGVKEEI EKLKSIIVVR NKLYLKKNDI
SKRLEKARDE LENLQVELEN LRKKKKEELK NEITKVQMKI DEIKSKLSKL SWVERIDQNV
VFEIYGLIKK IDNVKEEIDK LEEEEKSLVE IINTKDNEIN SKLKLLGATS EKDLESISLR
LKHLSLLSKM YGEGISQTEE EEPLWHIFIQ DPSIIERAED EEQKYQEIKN AIEKEKIDIQ
NQIEKLEGSA KYSKDLSILS GIAGVVLLAL GLLFNKIALF MYLPSVLFLG FAVLLLLKSR
NNISKLSVLQ EKLVELMMHQ TEQPQVWKLL SQYGVKNIRD LRKKYSEFLE WKAANVEKQK
KIIELKEIEQ EIIKELSKFN VNGYAQMVVS AVENLQRTFN EVQELIYEKE TLERKLTQVR
GEYVSKQKEL NLLHNHLEES LKTNGVSKQD IENYRTDFEN YLKLKSELSD NITTLKDLEN
SLENEDLDRE IHSCKLSVEN QIKIINELEQ MYQDICKKIE ENSVNKELLS ELLVKKDELE
FKLSLINLIG SYIPRLFEHL KDSYSKFVES YYKNFSDEFI KFFNYVSGQT KNFFVTPELS
VKILVEGDLK DPSEYLSGST KDLLIFGIKN ALYKSFYDGN IPLVIDNTLI RFDDERLKRI
CEYLKEESNY RQIILLTSDK RIIKHFHKNT NVLYLEG
|
|---|
| |