Gene Fnod_0714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0714 
Symbol 
ID5453034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand- 
Start bp775944 
End bp776942 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content33% 
IMG OID640874460 
ProductABC-2 type transporter 
Protein accessionYP_001410226 
Protein GI154249401 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTTACT CATTTTTAGT CATGAATTTT CGCAGTAAAT TTTTGTTAGT CATGAATTTA 
ATACTACCAA TCATATTTAT GCTTATGTTC GGCGCAGTTT TTGGTAAGCA GAGTGGTGCT 
TATAAAGTTG CCTATTATTC AGATAGGGAT ATTAATATAG AGAGCGGTAA TTGGGTAAAA 
ATCGATAAAC CATCGGATGT TGAAAGTATA AAGGCTTTAA AGTTTGACAT AGTCATTTTG 
GCAGAGAAAG GAAAAATAGA TGTTTATTAT TTGAGTAGCA TGGCACAATC AGAAAGGGAC 
GTTTTGCTTT TTAGAACAAA GTATTCTTCC GCTCAAAATC AAAGTTCTGT TATTGAAATA 
AAAGCACATA ACCTAGAGTT GGAAAGGCAA CTAAGTGATC TTGAATATAT TATGATAGGC 
GTTATAGCTG TTTCTTTGCT ATCAGTTGGT TTAAACGCCG GTGTTAGCAT CTTTTCGAAA 
TACGTAAGAT ACGGTCTTTT TAAAAGATTT ATGGTAACAA AGGTTAAACC TGCGCATTTG 
TTATTCAGTT CAGTTGGAGC ACAGCTCATC ACAGGTATAA TTTCTTCTTT TATTATTTTG 
ATTTTGTCAA GATTAGTTTT TGGAGTCAAT TTATTTGTCA AACTTCATGA TATTCCTTTG 
TACATCGCGG TTGTTTTTGC TTCGGTAATG ATAAACCTGT CAATTGGTGT TTTGCTAAGC 
TTATTTTTTA AAAAGGCTGC AGAGAGTATC TCTTCTTTGA TTTACACTAT CTTCATATTC 
TTCTCCGGGG TATATTTTCC AATAACTATT ATTCCAAAAT CTTTAAGAAT AATATCGTAC 
TTCACACCAC CAAGGTACGT TCATATGATG TTTCAGAAAT TGTATGGAGT TAATTCCATG 
GATAACGTAC TTTTCTTTGT GTTGATAATT GGATTTTCAT TTTTTGGCTT ACTTCTTGGA 
AGTTATGCGA TTAAAAAGTT TTTGAAACCT ACCGCCTGA
 
Protein sequence
MFYSFLVMNF RSKFLLVMNL ILPIIFMLMF GAVFGKQSGA YKVAYYSDRD INIESGNWVK 
IDKPSDVESI KALKFDIVIL AEKGKIDVYY LSSMAQSERD VLLFRTKYSS AQNQSSVIEI 
KAHNLELERQ LSDLEYIMIG VIAVSLLSVG LNAGVSIFSK YVRYGLFKRF MVTKVKPAHL 
LFSSVGAQLI TGIISSFIIL ILSRLVFGVN LFVKLHDIPL YIAVVFASVM INLSIGVLLS 
LFFKKAAESI SSLIYTIFIF FSGVYFPITI IPKSLRIISY FTPPRYVHMM FQKLYGVNSM 
DNVLFFVLII GFSFFGLLLG SYAIKKFLKP TA