| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0686 |
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| Symbol | |
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| ID | 5452501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 751849 |
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| End bp | 752589 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640874432 |
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| Product | tRNA pseudouridine synthase ACD |
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| Protein accession | YP_001410198 |
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| Protein GI | 154249373 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000903127 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGACGTG TAGCTATTGA ATTTTCCTAC GATGGAACGG ACTTTTTTGG TTATCAGATT
CAAAATAATG TAAGAACTGT CCAAGGTGAA TTGGAAAAAG CATTAGAAAA GGTCTTTAAA
ATCCATATAG ATACATACGC TGCGGGACGG ACGGATACAG GTGTACATGC AAATGGTCAA
GTAGTATCGT TCGACTGCCC AAATGATAGG CTAATGGAAA ATGATATAAA AAATGCAATA
AATGCTAATT TACCTGGTGA TATTTACATA AAAAAAGTAT GGTTCACACA TCCAACTTTT
AATCCACGTT ACGAAGCGAA AAGAAGAATT TACCATTATT ATATAGATAC ATCCAAATCC
AAGAATCTTT TTACAAGGCG GTACGTGTGG TGGTTTCCAT ATGAACTTGA CATTGAAAAA
ATGAGAATAG CCGCTAAATA TTTGATTGGA GAACACGATT TCATTTCTTT CAGCAAAAAA
GGCGAAGAGA ATACCAAAAC TATAAGAACG ATAAACAATT TAAGAATAAT TGAAATAAAA
AATGGACTAA TTCTAATCCG AGTTGAAGGA ATATCATTTT TGAGAGGGAT GGTAAGGAGC
ATCGTAGCAA ACCTCGTACG TGTTGGAACT GGAATATGGG AACCTGAAAA AGTAAAGGAG
GTGTTAGAAT CAAAAGATCG TTCAAAATCA GCTGGTTTAG CACCTGCGCA TGGATTATTC
TTATACAAAG TTTTATTTTA G
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| Protein sequence | MRRVAIEFSY DGTDFFGYQI QNNVRTVQGE LEKALEKVFK IHIDTYAAGR TDTGVHANGQ
VVSFDCPNDR LMENDIKNAI NANLPGDIYI KKVWFTHPTF NPRYEAKRRI YHYYIDTSKS
KNLFTRRYVW WFPYELDIEK MRIAAKYLIG EHDFISFSKK GEENTKTIRT INNLRIIEIK
NGLILIRVEG ISFLRGMVRS IVANLVRVGT GIWEPEKVKE VLESKDRSKS AGLAPAHGLF
LYKVLF
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