| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0685 |
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| Symbol | |
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| ID | 5453309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 750206 |
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| End bp | 751852 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640874431 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001410197 |
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| Protein GI | 154249372 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0276799 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGTATTA AAGAACTTTT CTTTGTATAT ACATGTATTA TTGTTGGTTT GATAATGATT
ATCACAACAC AACCTGTTGT ATTTAATACA GATATACCTT TACTTGGTAT AGCTCTGGCT
TTGTTGTTTT TCTCCCAATC TGTTGAAATA CCTATAGGAG GATTAGTATT TAATATTAAG
AGTTTTAGCA TGCTTTACTT ATTGCTTTTT ATTCGGCCAG AAAGTATACT AATACTGAGT
ATTATTACTC TACTTGTTTA CATAAAAGAT TTACGTCGTT TCCTATTCAA GGTCTCTTTC
GAAGTATTAC AAATTGGATT TGGCACTCTA TTGTTTAAAG CATCTCCAAA TGATTATCTT
AAAATAATAT CATTCGCAAT CGGCTATATG CTTAGTAATG TTTTGGTGAC GATTTTTTAC
ATTAAGTTTT TTGGAAAAAC AAATGTAAAA GCTTATATAA GGGCATTTTT GCTTGTATTT
GCGTTATCTT TATTCGGCTC AATGATTTTA ACAACTATAT ACACATTCAA CGAAGTCAAG
TTATCCTCAC TGATTTTTGT TTCAGTTCTT TATTCTGGAT TTTTGATACA ACTTTATTAC
ACTGTATTTT CTGAACTTTG GCACAAAGAA CTTACATTGG AAAAGGAACA AATAGCAAGA
GAGATAGAAA ATCTTAAGAA ATTACCGGAA ATTCTCGAGA AAAGTTCAAA AGAAGATATA
GACGATGTTT TACAAGATGT TTTAGCTACA ACTTGTAAGC TAATAGGATT TGAGTACGCA
TTGCTTAGTA TATTTGATTT CAGGAGCGGG AAAGTAACAA GAATATCAAA GTATGGTATA
AAAGATGAGG ATTTTGAAAA ATTAAAACAA AACAGGCCTG ATATAAAATC GACTTACGTT
TTAATGCAAC AACGCTTTGA TGTCGGTGGT GCTTACTTTA TCCCAAACGG AAGTGTTGAT
TTATCCCAAT CATCAATTTA CAGACCATCT GAATACTTTA AATTAGAGGT TGAAAATGCT
TGGGATCCAA ATGATTTATT CATTGTCCCA TTGATTTACA AAAACAAAAC AATAGGATAT
ATAAGTTTTG ATAAACCAAC AAATATGCTA AGGCCTTCAA AACGTGAAAT TGAACTTGCC
AAGTTTTTTG CATGGCAGAT AACTAGATTA CTATCAGAAA GTAAATATTC CGTTTTCTTC
CTTTCCGATT ACAAAAAAGA GCAAACATAC GCATTTCTTA TGGAAGAAAT CTCGAAAAAT
ATCGAATTTG GGAAGAGTTT TCTAATAGTT TACGTTGACA TTGATAAATT TGAAAAGGTA
AATATAACGC ATGGTTTTAA AGCTGGGGAC GAAATGTTAC AAGAACTTAG AAATATTTCT
GAGGAAGAAA TTAAAAACCT TGGAATTTTT TCACAATTCA ACGACGAACT TATAATGCTA
CTATGGTCAA TGAGCAAATC GGACGGGGTG CTAGTCGCAG AGAGAATAAT TGAAAAATTC
AAGAGAAAGT ATCCAGATGT CAGTTTAAGT GTTAGCGTTG TTAAATATCC AACTGATGCA
CAAACATTTG ATGAATTACT TGAAAAAATT AAAGTAGCTT TGACAACAGC TAAAAAATCT
GGAGGAGGAC GTATCGTAAC ATTATGA
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| Protein sequence | MSIKELFFVY TCIIVGLIMI ITTQPVVFNT DIPLLGIALA LLFFSQSVEI PIGGLVFNIK
SFSMLYLLLF IRPESILILS IITLLVYIKD LRRFLFKVSF EVLQIGFGTL LFKASPNDYL
KIISFAIGYM LSNVLVTIFY IKFFGKTNVK AYIRAFLLVF ALSLFGSMIL TTIYTFNEVK
LSSLIFVSVL YSGFLIQLYY TVFSELWHKE LTLEKEQIAR EIENLKKLPE ILEKSSKEDI
DDVLQDVLAT TCKLIGFEYA LLSIFDFRSG KVTRISKYGI KDEDFEKLKQ NRPDIKSTYV
LMQQRFDVGG AYFIPNGSVD LSQSSIYRPS EYFKLEVENA WDPNDLFIVP LIYKNKTIGY
ISFDKPTNML RPSKREIELA KFFAWQITRL LSESKYSVFF LSDYKKEQTY AFLMEEISKN
IEFGKSFLIV YVDIDKFEKV NITHGFKAGD EMLQELRNIS EEEIKNLGIF SQFNDELIML
LWSMSKSDGV LVAERIIEKF KRKYPDVSLS VSVVKYPTDA QTFDELLEKI KVALTTAKKS
GGGRIVTL
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