Gene Fnod_0563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0563 
Symbol 
ID5453255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp621874 
End bp623076 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content27% 
IMG OID640874311 
Producthypothetical protein 
Protein accessionYP_001410082 
Protein GI154249257 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAATAT TAATGGTCGC CCCTTTAAGT TTGACTTATC CACCTAAGGA TGGATACTCA 
ATGGTTGTTA TTTATTTGGC ATATTTTCTG AAGAATTTTT ATAACGTAGA ATCAGATATT
ATGGTTCCAG AAGATGAAAA ATATTCGGCT AAGGATTTAA TTGATTCTGG AATTTTTAAC
AAAGTTTATA ATTACCAAAT AAATAGTAAA TGGAGAGCTC TACTTAAATC TTTTTTCTCA
AAAGATGTTT ATACTATGGT AAGAAACGAT ATAAATGATA AAGACTTAAA AAAATTCATT
GTAAGCATAA ATAATGCTAA ATACGATGCT ATCATATTCA ATCATAGTTT CTCATTTCAT
TTATATAGAA AATTAATAAA ACATATAAAC GACTACAATT ACAAGATTAT TTATTGGAGT
CATAATATCG ATTACTTGTA TTTTAAAAAT ATGTCTAAAG AAGCAAGAAA TCCAGTAGAG
AAATTCTTTT ATTACTTTAG CTATAAAAAA TTAAAAAATA TAGAAGTTGA TTTTATTAAG
AGCGTCGATA ACATAGTTTC TGTCTCCAAA CATGAGGTAG AGTATTTAAG AAAAATAAAT
CCTAGAGCTA ACGTTTTTTG GATTCCTCCC CTGATACCTG AATTGAAATT AAACAAAGAA
GAGAAACTTT GCGATTTTGA TGATAAACTT AAAAATTACC AGTATAAAAT TTTATTCACC
GGCAGCTTAG GAATACCACA AAATGTAAAA CCAACAATTT GGTTCGCTAA AGAAGTTTTT
CCGATTATAA AAAATAAGTT AAATGCTTGT TTTATAATTG CAGGTAAGAA TCCTTCTAAG
GAAATTATTA ATTTATCAAA AAGAAATAAT GATATAATAC TGTATCCAAA TGTTCCTTCA
ATGACCCAGT TATATAAAAT ATCAGATTTA GTTGTTGTTC CTTTGTTTAG TTCATCAGGT
ATAAAATTAA AGCTTATAGA AGCATTAAAG TATGAAAAAA AGGTTGTAGC AAGGCCTGAA
GCTCTTTTAG GTGCTGGACT TGAGAAACTA GTACCAAACG CTAGAGAACC ACAAGAATTT
GCAAAAAAAT GTATTGATGC TTTAGAAGAA AAAATAGATT ACACGAATAT ATTTAGAGAA
TTCCGTAATA TCTATGATAA TAAAATGATT ATTGATGACA TAATTAAAAT TTTATCTTGG
TAA
 
Protein sequence
MKILMVAPLS LTYPPKDGYS MVVIYLAYFL KNFYNVESDI MVPEDEKYSA KDLIDSGIFN 
KVYNYQINSK WRALLKSFFS KDVYTMVRND INDKDLKKFI VSINNAKYDA IIFNHSFSFH
LYRKLIKHIN DYNYKIIYWS HNIDYLYFKN MSKEARNPVE KFFYYFSYKK LKNIEVDFIK
SVDNIVSVSK HEVEYLRKIN PRANVFWIPP LIPELKLNKE EKLCDFDDKL KNYQYKILFT
GSLGIPQNVK PTIWFAKEVF PIIKNKLNAC FIIAGKNPSK EIINLSKRNN DIILYPNVPS
MTQLYKISDL VVVPLFSSSG IKLKLIEALK YEKKVVARPE ALLGAGLEKL VPNAREPQEF
AKKCIDALEE KIDYTNIFRE FRNIYDNKMI IDDIIKILSW