Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0558 |
Symbol | |
ID | 5452205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 616442 |
End bp | 616900 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640874306 |
Product | RNAse H family protein |
Protein accession | YP_001410077 |
Protein GI | 154249252 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0328] Ribonuclease HI |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATCT ACGTCGATGG TTCTTACAAC GAATCATTAA ATTTAGCAGG TTATGCATTT GCTGTTGTTG AAAATGAAGA AATAAAATTT GCACAAAAAG AAGCAATGAT ATTAAGAAAT GGCAATTCCG TAACAGCCGA GCTAATTGGA GTAATAAAAG CACTAGAATA CTGCCAAAAT CAGGGTATAC AAGAAGTCAC AATTATACAC GATTACAATG AAATACCAAT GTTCGCATTT TCGTATAGAA AGACTAAAAA CCCGAGTATA AACTCATACG TGAGAAAATT AAGAGAAATG CGTGAAACAA TAAAAGTAAG CTTTCTAAAA GTCAAAGCCC ATACAGATGA CAGATTCAAC AATTACGTTG ATGAACTATC TAGAAAAAGT ATAGAAGAAT TTTTAGAAAG ATTGCTAAAA AATAAAAACA ATAGTAAACA CTCTTTAGAA AATCGATAA
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Protein sequence | MKIYVDGSYN ESLNLAGYAF AVVENEEIKF AQKEAMILRN GNSVTAELIG VIKALEYCQN QGIQEVTIIH DYNEIPMFAF SYRKTKNPSI NSYVRKLREM RETIKVSFLK VKAHTDDRFN NYVDELSRKS IEEFLERLLK NKNNSKHSLE NR
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