Gene Fnod_0547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0547 
Symbol 
ID5452507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp604182 
End bp605156 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content39% 
IMG OID640874296 
ProductRieske (2Fe-2S) domain-containing protein 
Protein accessionYP_001410067 
Protein GI154249242 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000394367 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAAGA ATCAATGGTA TATTGTGCTT TCTTCTAAAG AGGTTAAAAA GGGAGAGCTT 
ATAGGTGTTA CTAGGTTTGG TGAGAAACTT GCACTTTGGA GAGATGAGGC AGGGAAGGTT
CATTGTATTT CCGATGTATG TTGTCACAGA GGAGCTTCTA TTTCACATGG AAAGATTCTT
TCAAATGGCG AGCGTGTTAT GTGTCCATTC CATGGTTTTG AGTACGATTC AACTGGACGG
GTGTGCGTGA TTCCTGCAAA CGGAAGAAAT ACACCGGTAA ATGAGAATTT TAAGGTCAAA
GCTTATCATA CTTACGAATT AGCGGATTTT ATCTGGATTT GGTATGGTGA CGGTGAGCCA
ACAAATCCAC CGACGTATTT TGAGGATATA ACGGATGATT TGAGTTACAG TGAATTTAAA
GAAGTTTGGA ATGTACACTA TTCGCGGGCT ATAGAGAATC AGCTTGATGT TGTGCATGTA
CCGTTTGTGC ATTACAACAC TATTGGTAGG GGCAATAGGA CAGTTGTGGA TGGTCCAATT
GTTAAGTGGT TTGGAGATAC GATGTTTTAT TTCTATGTCT TTAACCGAGT TGACGATGGA
AGACCTGCGA GAAAACCCGA GGAGATAGGT TTAAATGAAA AAAGTCAAGT GTACTTGGAG
TTTAAGTTTC CAAATATGTG GCAAAATCAC ATAGATGAGA AAATTAGGGT AACGGCTGCT
TTTGTTCCTA TCGATGATGA ACATACCATG ATTTATCTGA GGTTTTACAT CGGTTTTACG
AAGATTAGGT TTTTGGATAA GTTGATAACG TTGATGGGTA TGCCGTTTAA TAGAAAGATT
TTACACCAAG ATAAGCGTGT TGTGGAAACT CAGATTCCAA AGAAGAGCGA GCTTCGCATG
GGAGAAAACC TTATACCCGG CGATGCGCCT ATACTTGAGT ACAGAAAAAA GAGGGAAGCT
TTGAAAAATA GTTGA
 
Protein sequence
MIKNQWYIVL SSKEVKKGEL IGVTRFGEKL ALWRDEAGKV HCISDVCCHR GASISHGKIL 
SNGERVMCPF HGFEYDSTGR VCVIPANGRN TPVNENFKVK AYHTYELADF IWIWYGDGEP
TNPPTYFEDI TDDLSYSEFK EVWNVHYSRA IENQLDVVHV PFVHYNTIGR GNRTVVDGPI
VKWFGDTMFY FYVFNRVDDG RPARKPEEIG LNEKSQVYLE FKFPNMWQNH IDEKIRVTAA
FVPIDDEHTM IYLRFYIGFT KIRFLDKLIT LMGMPFNRKI LHQDKRVVET QIPKKSELRM
GENLIPGDAP ILEYRKKREA LKNS