| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0488 |
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| Symbol | |
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| ID | 5452668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 524335 |
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| End bp | 526215 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640874237 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001410009 |
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| Protein GI | 154249184 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3525] N-acetyl-beta-hexosaminidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGAAAG TTAATGGATA TGATTTTGAA ATTTACCTTA TTCCGTTTCC AAAAAAGTTG
GAAGTTAAAG ATGGAACTTT TTTATTAAGC TCAAATCGGT GGGTTTTTTC TGAGAGTGTA
GATATTGGAA CGAGTTTAGT GAATTTCTTA GAGAAAGAAG GTATTTCGTA TAGATTTGAT
CGTTACAAAA GTCCCAATCT ATACTATGGC GATATTTTCA TTGGTGTTAA TCCATACGTT
GTACCGCACA AAGAAGGGTA CAAATTATTC ATGGATGATT ATATAACTAT TCTTGGTCAC
GACGAAAGGG GTTTATTTTA CGGTGTTCAG ACGTTAAAGC AGTTGATTAG ACAATTTGGC
AAAAAAATAC CGAAACTTTT TATAGAAGAT TATCCTGATT TTCCAAACAG GGGAATAATG
ATAGATATCA GTCGCGATAG GATGCCAAAG CTGGATACTT TGAAATATAT TATTGATAAA
CTTTCTGAGT TAAAAATAAA TCAGGTTCAA TTATATATGG AGCATACGTT TGCGTACAAA
GAACACGAAG AAGTTTGGAA GGATTATTCT CCGTTAACAC ATGAAGAGAT AATTGAGCTT
GATAAATATT GCAAGGAACG GTATATCGAA CTTGTGCCAA ATCAGAACAC ATTTGGACAT
ATGAGTAAGT GGCTTATACA TGATAAATAC AAACATCTTG CGGAAGCTCC GGAAGGATAT
GAAACACCTT GGGGTGGGCG CTATGAATAC CCGTTCTCGC TTTCTCCCGC TGTGCCTGAA
TCGGAAAAGT TTGTTGAAGA GATTCTTGAT GAACTATTGC CTTTGTTTTC AAGTGAGCAG
GCTAATGTAG GATGCGACGA AACGTTCGAT CTTGGGGTCG GTAAATCGAA AGAACTTTGC
GAGAGATATG GGAAAGGGAA AGTATATTTT GATTTTCTGA TGAAGATTTA CAAAATTGCT
AAAAAGCACA AGGAGTCTGT GATGTTCTGG GGGGATATCA TAGAAAATCA CCCGGAGTTT
ATCAGGTATC TTCCAAAAGA TATGATACCT ATGGTTTGGG GATATGAAGC AGATCATCCA
TACGAAGAAA AATGTGGTTT GTACGCTGAC AGTGGTCTTT CGTTTTACGT TTGCCCTGGT
ACTTCTACTT GGAATACTTT TGTTGGAAGA GCCGATAATG CAGTGGTAAA TATAAAGAAC
GCAATTTTCA ATGGTAAAAA ATACGGTGCG ATAGGTGTAC TCACTACCGA TTGGGGCGAT
AACGGTCACG TACAGCATTT ACCTTTCTCA TGGATCGGTT TTTCTTACAG CGCGGAAATG
AGTTGGAATG TTTCAGAAGT TAATATCGAT AAATTTTTAA AAGCTTTGGA TATCAATATT
TTTGAAGTTA ATCCTGATGA ATATCCTATT GCGGAATTAA TTTACAAACT TGGAATAGTT
CACAATAAGC TCTTTTATAC GCCCAACGGT ACACCTTTCT TTTACGCGTT CTTGTATCCC
GAAAGAAACG GGAATTATAA ATTAGAACTC GAAAAAATCA AAGAAGTTGA AAATGATGTG
CTTTCATTAA GAAAAGAAAT TCAAAAGTTT AGGAGTGATG AAGATAGTAA ACTATCATTC
GTTGTTGACC AAATTTTGAA TAATATAGAT TTTGCATTGC TGGGGCTTAA AGTTATGAAG
TTTTTGAGTA TATACAAAGA CATTCAAGCG GTTCCAGAGA ATGAATGGAT GGAATTTGAG
GATGAATTTA ATAAAGTTAT CGAGTCTTAC AGAAGAATAT GGTTGGTTCA AAATAGACCT
GGTGGTCTTG AGCAGAGTAT CTATAAACTT TCGAGGATTC TAAGAGTCAG ACGTGGTGAC
CTTCGGGGGT TGATTTTTTG A
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| Protein sequence | MRKVNGYDFE IYLIPFPKKL EVKDGTFLLS SNRWVFSESV DIGTSLVNFL EKEGISYRFD
RYKSPNLYYG DIFIGVNPYV VPHKEGYKLF MDDYITILGH DERGLFYGVQ TLKQLIRQFG
KKIPKLFIED YPDFPNRGIM IDISRDRMPK LDTLKYIIDK LSELKINQVQ LYMEHTFAYK
EHEEVWKDYS PLTHEEIIEL DKYCKERYIE LVPNQNTFGH MSKWLIHDKY KHLAEAPEGY
ETPWGGRYEY PFSLSPAVPE SEKFVEEILD ELLPLFSSEQ ANVGCDETFD LGVGKSKELC
ERYGKGKVYF DFLMKIYKIA KKHKESVMFW GDIIENHPEF IRYLPKDMIP MVWGYEADHP
YEEKCGLYAD SGLSFYVCPG TSTWNTFVGR ADNAVVNIKN AIFNGKKYGA IGVLTTDWGD
NGHVQHLPFS WIGFSYSAEM SWNVSEVNID KFLKALDINI FEVNPDEYPI AELIYKLGIV
HNKLFYTPNG TPFFYAFLYP ERNGNYKLEL EKIKEVENDV LSLRKEIQKF RSDEDSKLSF
VVDQILNNID FALLGLKVMK FLSIYKDIQA VPENEWMEFE DEFNKVIESY RRIWLVQNRP
GGLEQSIYKL SRILRVRRGD LRGLIF
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