| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0392 |
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| Symbol | |
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| ID | 5452181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 424559 |
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| End bp | 426640 |
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| Gene Length | 2082 bp |
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| Protein Length | 693 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640874141 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_001409914 |
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| Protein GI | 154249089 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAGT GGAGGAAAAA TTTATTTGGG AGAGAATGGC TATTTCAGCA CGGTAAAGTA
GCAAAACAAT CTGCAGGCTC AATATGGGCG AGGTTTGGTG ATAGTGTTGT TCTTGCAACG
GTTAATGTTT CAGATAATGT TGTTGAAGGA ATAGACTTTG TTCCTTTAAC AGTCGAGTTT
ATGGAAAAAT TTTACGCTGC TGGAAAAATA CCTGGAGGCT TTGTAAAAAG AGAAGGCAAA
CCATCAGAAA GTGGAATACT TTCATCGAGA CTTATTGATA GGCCTATTAG ACCTCTTTTC
CCAAAAAATT TAAGGAATGA AGTTCAAGTT ATAGTAACTG TCCTTTCCGT TGACCCCAAT
TGTCCAACTG ATGTGCTTGG AATTACCGCC GCTTCGCTTG CTTTGAATAT TTCAAGAGTC
CCTTTTGATG GTATCGTAGC CGGTGTTCAA ATAGGATACG TTGACGGTCA ATTTATCGTT
TTTCCAACTG CAGAACAATT GGAAAGAAGT AAGATAGATA TAGTAGTTGC TGGTACAAAA
GATGCTATAA CGATGGTCGA AGGTGAAGCA AAGGAAGTTA CTGAAGAAGA AATGCTTCAA
GCACTTATGA CAGCGCATGA AGCAATTAAA CAAATTGTTG CTTTCCAGGA AGAGGTAATT
AAAGAATTTA ATGTTGAAAA AATGCCTCTC CCAGAACCAA AGTACAATGT TGAATTAGTC
GAAAAATTCG TAGAATATAT AGATATGACG GAACTTGAAA AGAGAATATT CGCTAGAGGT
AAACAAGAAA GAGCGGAAAT GGCTGATGAG TATTACGAAA GTATTGTTCA AAAATTCTTT
GAAGATAACA ATATACCTGA AGAAGAACAA GAAGAATACG CAATACCTCT GAAGGAAAAA
TACGATGAAA TATCAAAAAA ATTGATGCGA AAGATAATTA TAGAAAGAGG GCTAAGGGCT
GACGGAAGAG GTCCAAAAGA TATAAGACCA ATTACTTGTG AAGTCGGGCT TTTACCACGA
ACTCATGGTT CTTCGCTTTT CACACGTGGT GAAACTCAAA GCTTAGGAAT AGTTACATTG
GGATCACCTG CGGAAGAACA AATAATCGAT ACTTTAATTG AAGAAGGTAC AAAGAGATTT
ATATTGCACT ATAATTTCCC GCCGTTTTCA ACTGGTGAAG TCAAACCGCT GAGAGGACCA
AGTAGAAGGG AAATCGGTCA TGGTCATCTT GCTGAAAGAG CGGTTAAGGC GATAATTCCA
CCAGAGGACG AATTTCCATA TGTCATTCGT GTTGTTTCAG AAATTCTTGA ATCAAACGGT
TCTTCCTCAA TGGCAACGGT CTGTTCAGCC TCGCTCGCGC TTATGGATGC TGGTGTACCT
ACTAAAAAAC ATGTTGCAGG TGTTGCGATG GGACTAATCT TAGAAGAAGG CAAAGGAGTT
ATATTAACAG ATATAATAGG TCTTGAAGAC CACTGGGGAG ATATGGATTT CAAAGTTGCA
GGTACGAAAG ATGGTATTAC CGCATTCCAA ATGGACTGTA AAGTTTCTGG GGTTAGTGAA
GAACTTTTAA GACAAGCATT GTACCAAGCT AAAGAAGCCA GAATGTTTAT ACTAGATAAA
CTTTATGAAA CTATTTCTGA ACCCAGGAAA GAACTTTCTC CTTATGCACC AAGAATTAGT
TGGTTCTTCA TAGATCCAAC AAGATCTGGA GAACTCATTG GACCTGGTGG AAAAACTATA
AAATCGATAA TTAAAATGTT CGATGTTGAA ATTTCGTTAG ATGATTCCAC TGGTAAAGTA
ACTGTTAGTG GTGTTGATGC CGAAAAAGTA CAGGAAGCCG TTGAATATAT TCAAAATATG
TTTAGAGACA TATCAATTGG CGATTTGTAC ACAGGAAAAG TTACGAGAGT TGAAAACTAC
GGTATATTTG TTGAAATCAT GCCCGGAAAA ATAGGTTTAG TTCATTCAAG CAAACTTGGG
AATGTAAAAC CCACATCGTT TAAAGTTGGA GATAAAATAA AAGTTGAAGT TATAAACATC
GACGATGCGG GAAGGTTGCA ATTTAGGAGG TTGGAAGAGT AA
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| Protein sequence | MKEWRKNLFG REWLFQHGKV AKQSAGSIWA RFGDSVVLAT VNVSDNVVEG IDFVPLTVEF
MEKFYAAGKI PGGFVKREGK PSESGILSSR LIDRPIRPLF PKNLRNEVQV IVTVLSVDPN
CPTDVLGITA ASLALNISRV PFDGIVAGVQ IGYVDGQFIV FPTAEQLERS KIDIVVAGTK
DAITMVEGEA KEVTEEEMLQ ALMTAHEAIK QIVAFQEEVI KEFNVEKMPL PEPKYNVELV
EKFVEYIDMT ELEKRIFARG KQERAEMADE YYESIVQKFF EDNNIPEEEQ EEYAIPLKEK
YDEISKKLMR KIIIERGLRA DGRGPKDIRP ITCEVGLLPR THGSSLFTRG ETQSLGIVTL
GSPAEEQIID TLIEEGTKRF ILHYNFPPFS TGEVKPLRGP SRREIGHGHL AERAVKAIIP
PEDEFPYVIR VVSEILESNG SSSMATVCSA SLALMDAGVP TKKHVAGVAM GLILEEGKGV
ILTDIIGLED HWGDMDFKVA GTKDGITAFQ MDCKVSGVSE ELLRQALYQA KEARMFILDK
LYETISEPRK ELSPYAPRIS WFFIDPTRSG ELIGPGGKTI KSIIKMFDVE ISLDDSTGKV
TVSGVDAEKV QEAVEYIQNM FRDISIGDLY TGKVTRVENY GIFVEIMPGK IGLVHSSKLG
NVKPTSFKVG DKIKVEVINI DDAGRLQFRR LEE
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